Strain Fitness in Pseudomonas simiae WCS417 around PS417_04955

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,103,162	-				-0.5
1,103,162	-				+0.5
1,103,397	+		PS417_04950	0.27	-0.8
1,103,398	-		PS417_04950	0.28	-0.5
1,103,545	-		PS417_04950	0.51	-1.9
1,103,545	-				+2.5
1,103,550	+		PS417_04950	0.52	-0.5
1,103,551	-		PS417_04950	0.52	-0.8
1,103,551	-		PS417_04950	0.52	-0.5
1,103,551	-		PS417_04950	0.52	-1.1
1,103,551	-		PS417_04950	0.52	+0.2
1,103,551	-		PS417_04950	0.52	-0.9
1,103,627	-				+1.5
1,103,661	+		PS417_04950	0.70	+0.5
1,103,661	+		PS417_04950	0.70	+1.1
1,103,661	+		PS417_04950	0.70	+0.4
1,103,662	-		PS417_04950	0.70	+2.6
1,103,662	-		PS417_04950	0.70	-1.5
1,103,729	+		PS417_04950	0.80	+1.8
1,103,839	+				+0.3
1,103,861	+				+0.6
1,103,911	+				-0.8
1,103,912	-				+0.1
1,104,086	+		PS417_04955	0.29	+0.5
1,104,086	+		PS417_04955	0.29	+0.4
1,104,086	+		PS417_04955	0.29	+0.5
1,104,087	-		PS417_04955	0.29	+0.7
1,104,087	-		PS417_04955	0.29	-0.8
1,104,137	+		PS417_04955	0.37	+1.4
1,104,137	+		PS417_04955	0.37	+1.9
1,104,137	+		PS417_04955	0.37	+0.4
1,104,138	-		PS417_04955	0.38	-0.3
1,104,138	-		PS417_04955	0.38	-2.1
1,104,187	+		PS417_04955	0.45	+0.3
1,104,187	+		PS417_04955	0.45	+0.7
1,104,187	+		PS417_04955	0.45	+2.6
1,104,187	+		PS417_04955	0.45	-1.4
1,104,188	-		PS417_04955	0.46	+0.7
1,104,188	-				-0.8
1,104,188	-		PS417_04955	0.46	-0.5
1,104,198	-		PS417_04955	0.47	+0.9
1,104,410	+		PS417_04955	0.81	-1.0
1,104,423	+		PS417_04955	0.83	-2.4
1,104,569	-				-0.7
1,104,617	+				+0.3
1,104,617	+				-0.8
1,104,804	-		PS417_04960	0.31	+0.7
1,104,804	-		PS417_04960	0.31	-2.3
1,105,261	-				+0.5
1,105,266	+				-0.7
1,105,266	+				+0.8
1,105,267	-				+0.3
1,105,267	-				-0.4
1,105,267	-				-1.1