Strain Fitness in Pseudomonas simiae WCS417 around PS417_04940

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,099,017	+		PS417_04935	0.26	-0.1
1,099,017	+		PS417_04935	0.26	+0.5
1,099,018	-		PS417_04935	0.26	+1.1
1,099,020	+		PS417_04935	0.26	-0.1
1,100,231	-		PS417_04940	0.15	-3.5
1,100,389	-		PS417_04940	0.22	-1.5
1,100,416	+		PS417_04940	0.23	+0.2
1,100,447	-		PS417_04940	0.24	+0.8
1,100,662	+		PS417_04940	0.33	-0.9
1,100,902	+		PS417_04940	0.43	+0.4
1,100,902	+		PS417_04940	0.43	-1.2
1,100,902	+		PS417_04940	0.43	-0.1
1,101,755	-		PS417_04940	0.78	-1.6
1,101,755	-		PS417_04940	0.78	-0.3
1,101,772	+		PS417_04940	0.78	-0.7
1,102,323	+				-0.3
1,102,467	-				+1.3
1,102,553	+		PS417_04945	0.18	+0.6
1,102,554	-		PS417_04945	0.18	+2.2
1,102,618	+		PS417_04945	0.27	-0.3
1,102,622	+		PS417_04945	0.28	-1.7
1,102,623	-		PS417_04945	0.28	+0.5
1,102,741	+		PS417_04945	0.44	-0.3
1,103,162	-				-0.5
1,103,162	-				+0.5