Strain Fitness in Pseudomonas simiae WCS417 around PS417_04835

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
1,071,987	+		PS417_04830	0.37	-1.0
1,072,270	-		PS417_04830	0.58	+0.5
1,072,335	+		PS417_04830	0.63	-1.7
1,072,336	-		PS417_04830	0.63	+0.4
1,072,336	-		PS417_04830	0.63	-1.1
1,072,450	-		PS417_04830	0.71	-0.3
1,072,458	+		PS417_04830	0.72	-2.0
1,072,458	+		PS417_04830	0.72	+1.4
1,072,829	+				-0.6
1,072,985	+				+2.1
1,073,069	+				+0.5
1,073,070	-				-0.5
1,073,070	-				+1.7
1,073,070	-				-1.7
1,073,209	-		PS417_04835	0.19	-1.8
1,073,600	+		PS417_04835	0.53	-2.0
1,073,601	-		PS417_04835	0.53	+1.1
1,073,610	-		PS417_04835	0.54	+0.1
1,073,889	-		PS417_04835	0.78	-1.7
1,074,136	+				-1.9
1,074,170	+				+0.3
1,074,171	-				+0.5
1,074,349	+		PS417_04840	0.11	-0.9
1,074,350	-		PS417_04840	0.11	-1.1
1,074,383	-		PS417_04840	0.13	-0.6
1,074,383	-		PS417_04840	0.13	-2.1
1,074,385	+		PS417_04840	0.13	-1.1
1,074,502	+		PS417_04840	0.21	-1.0
1,074,739	+		PS417_04840	0.37	-1.1
1,074,739	+				+3.8
1,074,739	+		PS417_04840	0.37	+2.0
1,074,739	+		PS417_04840	0.37	-1.8
1,074,739	+		PS417_04840	0.37	-0.3
1,074,740	-		PS417_04840	0.37	-0.7
1,074,876	+		PS417_04840	0.46	-2.1
1,074,876	+				+1.5
1,074,877	-		PS417_04840	0.46	-0.7
1,074,877	-				-1.8
1,074,900	-		PS417_04840	0.48	-1.5
1,074,900	-				-0.1
1,075,080	+		PS417_04840	0.60	+0.5