Strain Fitness in Pseudomonas simiae WCS417 around PS417_27750

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,985,696	+				-0.8
5,985,696	+				-1.6
5,985,732	-				+0.4
5,985,744	+				-1.2
5,985,746	+				+0.5
5,985,746	+				-0.4
5,985,747	-				+1.7
5,985,747	-				-0.1
5,985,747	-				+0.2
5,985,747	-				-0.0
5,985,747	-				-0.1
5,985,837	+				-0.1
5,985,837	+				+0.2
5,985,837	+				+1.2
5,985,837	+				-0.4
5,985,838	-				-0.6
5,985,838	-				-1.5
5,985,950	+				+3.1
5,985,950	+				-0.2
5,985,950	+				-1.6
5,985,951	-				+0.5
5,986,001	+				-1.9
5,986,149	+		PS417_27750	0.29	-2.7
5,986,149	+		PS417_27750	0.29	-1.1
5,986,150	-		PS417_27750	0.29	+0.1
5,986,158	+		PS417_27750	0.31	-0.1
5,986,158	+		PS417_27750	0.31	-1.3
5,986,158	+		PS417_27750	0.31	-0.6
5,986,159	-		PS417_27750	0.32	-0.5
5,986,227	+		PS417_27750	0.50	-1.5
5,986,228	-		PS417_27750	0.51	+0.3
5,986,380	+				+1.9
5,986,381	-				-1.1
5,987,158	-				+0.1
5,987,218	+				-1.1
5,987,250	+				-0.1
5,987,273	+				-1.1