Strain Fitness in Pseudomonas simiae WCS417 around PS417_27630

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,956,762	+				+1.4
5,956,763	-				+0.7
5,956,764	+				+0.7
5,956,764	+				+0.2
5,956,764	+				+0.3
5,956,778	+				+0.3
5,956,778	+				-0.2
5,956,779	-				+1.4
5,956,779	-				+0.2
5,957,133	-				-0.3
5,957,148	-				+0.6
5,957,302	+		PS417_27630	0.16	-0.4
5,957,303	-		PS417_27630	0.16	+0.8
5,957,743	+		PS417_27630	0.50	-0.5
5,957,744	-		PS417_27630	0.51	-2.4
5,957,744	-		PS417_27630	0.51	-0.2
5,957,764	+		PS417_27630	0.52	+1.8
5,957,764	+		PS417_27630	0.52	+4.8
5,957,833	+		PS417_27630	0.58	-0.4
5,957,833	+		PS417_27630	0.58	+0.4
5,957,848	-		PS417_27630	0.59	-0.1
5,957,866	+		PS417_27630	0.60	-0.5
5,957,866	+		PS417_27630	0.60	-0.3
5,957,867	-		PS417_27630	0.60	+1.9
5,957,997	+		PS417_27630	0.70	+0.1
5,957,997	+		PS417_27630	0.70	+0.7
5,957,997	+		PS417_27630	0.70	-0.8
5,957,997	+		PS417_27630	0.70	+0.2
5,957,998	-		PS417_27630	0.71	+0.6
5,957,998	-		PS417_27630	0.71	-1.1
5,957,998	-		PS417_27630	0.71	+1.9
5,957,998	-		PS417_27630	0.71	+0.5
5,958,338	-				-0.5
5,958,349	+				-0.2
5,958,349	+				+0.3
5,958,349	+				+0.1
5,958,373	+				-0.0
5,958,373	+				+0.2
5,958,374	-				+2.2
5,958,374	-				+0.9
5,958,374	-				-0.6
5,958,374	-				-0.3
5,958,374	-				-0.3
5,958,374	-				-0.1
5,958,374	-				-2.5
5,958,382	+				-1.1
5,958,419	-				+0.7
5,958,419	-				+1.1
5,959,013	+		PS417_27635	0.36	+2.0
5,959,014	-		PS417_27635	0.37	+0.6
5,959,048	-		PS417_27635	0.39	+0.2