Strain Fitness in Pseudomonas simiae WCS417 around PS417_27335

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,897,858	-		PS417_27330	0.22	-0.1
5,897,858	-		PS417_27330	0.22	-0.7
5,897,893	+		PS417_27330	0.25	+0.5
5,897,894	-		PS417_27330	0.25	+2.2
5,897,972	+		PS417_27330	0.32	-2.0
5,897,973	-		PS417_27330	0.32	-2.5
5,898,014	-		PS417_27330	0.36	+0.8
5,898,049	+		PS417_27330	0.39	+0.0
5,898,049	+		PS417_27330	0.39	-0.8
5,898,168	+		PS417_27330	0.50	-3.0
5,898,168	+		PS417_27330	0.50	+1.0
5,898,291	+		PS417_27330	0.61	+0.5
5,898,292	-		PS417_27330	0.61	+0.7
5,898,292	-		PS417_27330	0.61	+1.8
5,898,404	-		PS417_27330	0.71	-1.1
5,898,504	-		PS417_27330	0.80	-0.1
5,898,504	-		PS417_27330	0.80	-1.2
5,898,749	-				-2.2
5,898,749	-				+3.3
5,898,749	-				-3.7
5,898,771	+				+0.3
5,898,772	-				-0.5
5,899,029	-		PS417_27335	0.61	+1.2
5,899,059	+		PS417_27335	0.69	+1.0
5,899,059	+		PS417_27335	0.69	-2.5
5,899,060	-		PS417_27335	0.69	+2.5
5,899,060	-		PS417_27335	0.69	+1.5
5,899,060	-		PS417_27335	0.69	+0.9
5,899,091	-		PS417_27335	0.76	+0.7
5,899,091	-		PS417_27335	0.76	+1.7
5,899,092	+		PS417_27335	0.77	-1.1
5,899,092	+		PS417_27335	0.77	-2.1
5,899,092	+		PS417_27335	0.77	+1.9
5,899,092	+		PS417_27335	0.77	+0.3
5,899,092	+		PS417_27335	0.77	+0.8
5,899,092	+		PS417_27335	0.77	+1.3
5,899,093	-		PS417_27335	0.77	+0.8
5,899,093	-		PS417_27335	0.77	-2.5
5,899,093	-		PS417_27335	0.77	+1.4
5,899,093	-		PS417_27335	0.77	+1.3
5,899,093	-		PS417_27335	0.77	+0.9
5,899,093	-		PS417_27335	0.77	+0.9
5,899,093	-		PS417_27335	0.77	+2.1
5,899,300	+				-3.1
5,899,300	+				+1.5
5,899,301	-				+0.0
5,899,301	-				-1.4
5,899,306	+				-0.9
5,899,307	-				-1.9
5,899,307	-				-0.6
5,899,331	-				-0.7
5,899,487	+		PS417_27340	0.15	-1.8
5,899,488	-		PS417_27340	0.15	-0.5
5,899,643	+		PS417_27340	0.31	+0.8
5,899,644	-		PS417_27340	0.31	+2.5
5,899,706	+		PS417_27340	0.38	-2.5
5,899,707	-		PS417_27340	0.38	+0.4
5,899,908	-		PS417_27340	0.58	-1.2
5,899,974	-		PS417_27340	0.65	-1.3