Strain Fitness in Pseudomonas simiae WCS417 around PS417_27200

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,871,948	+		PS417_27195	0.69	-2.3
5,872,192	-		PS417_27195	0.87	-0.0
5,872,316	-				-2.3
5,872,316	-				-0.3
5,872,466	+				+1.8
5,872,466	+				+0.8
5,872,466	+				-1.3
5,872,466	+				+0.1
5,872,467	-				+0.7
5,872,467	-				+0.5
5,872,467	-				-0.4
5,872,470	+				-1.3
5,872,470	+				-0.8
5,872,471	-				-1.3
5,872,488	-				-0.4
5,872,492	+				-0.0
5,872,493	-				-1.1
5,872,511	-				-0.3
5,872,511	-				+0.1
5,872,511	-				-0.7
5,872,534	-				-0.6
5,872,544	+				+2.9
5,872,544	+				+0.9
5,872,645	+		PS417_27200	0.13	+1.2
5,872,646	-		PS417_27200	0.13	-0.4
5,872,995	+		PS417_27200	0.44	+1.5
5,872,995	+		PS417_27200	0.44	-1.0
5,872,996	-		PS417_27200	0.44	-0.8
5,873,395	+		PS417_27200	0.79	+0.2
5,873,412	-		PS417_27200	0.80	-0.2
5,873,675	+				-0.5
5,873,676	-				+0.4
5,873,697	+				+1.9
5,873,733	-				-0.3
5,873,733	-				-1.0
5,873,733	-				-0.0
5,873,733	-				-0.1
5,873,791	-				-1.2
5,874,053	+		PS417_27205	0.19	-0.8
5,874,219	+		PS417_27205	0.31	-2.7
5,874,219	+		PS417_27205	0.31	-1.2
5,874,423	-		PS417_27205	0.46	-0.0
5,874,423	-		PS417_27205	0.46	-2.4