Strain Fitness in Pseudomonas simiae WCS417 around PS417_26660

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,764,782	+		PS417_26655	0.59	+2.5
5,764,782	+		PS417_26655	0.59	+2.0
5,765,089	+		PS417_26655	0.74	+0.9
5,765,090	-		PS417_26655	0.74	+4.6
5,765,287	+		PS417_26655	0.84	+1.1
5,765,474	+				+3.7
5,765,475	-				+0.2
5,765,475	-				+3.0
5,765,486	+				+2.2
5,765,486	+				+1.3
5,765,486	+				+1.3
5,765,487	-				+1.3
5,765,810	+		PS417_26660	0.36	+0.6
5,765,810	+		PS417_26660	0.36	+1.4
5,765,811	-				+3.6
5,765,812	+		PS417_26660	0.37	+3.0
5,765,813	-		PS417_26660	0.37	+1.9
5,765,813	-		PS417_26660	0.37	+1.6
5,765,813	-		PS417_26660	0.37	+1.8
5,766,004	+		PS417_26660	0.73	+3.2
5,766,005	-		PS417_26660	0.74	+2.2
5,766,005	-		PS417_26660	0.74	+2.3
5,766,169	-				+0.6
5,766,535	-				-0.4
5,766,535	-				-1.6
5,766,538	+				+1.9
5,766,538	+				+1.7
5,766,538	+				+0.8
5,766,538	+				+2.7
5,766,538	+				+3.0
5,766,539	-				-1.9
5,766,539	-				+1.0
5,766,539	-				-1.7
5,766,539	-				-1.6
5,766,539	-				-2.6
5,766,539	-				-1.2
5,766,539	-				+0.0
5,766,606	-				-1.5
5,766,606	-				+0.8
5,767,017	+				+2.7
5,767,018	-				-1.4
5,767,018	-				-1.6
5,767,092	-				+0.8