Strain Fitness in Pseudomonas simiae WCS417 around PS417_26620

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,752,255	+		PS417_26610	0.80	-0.5
5,752,255	+				+1.6
5,752,256	-		PS417_26610	0.80	-2.0
5,752,304	-				-0.2
5,752,419	+		PS417_26615	0.13	-0.0
5,752,419	+		PS417_26615	0.13	-0.8
5,752,420	-		PS417_26615	0.13	+0.2
5,752,420	-				+3.1
5,752,607	+		PS417_26615	0.35	-0.8
5,752,609	+		PS417_26615	0.35	-2.1
5,752,610	-		PS417_26615	0.35	+0.6
5,752,610	-		PS417_26615	0.35	+1.2
5,753,179	+				-0.0
5,753,396	+		PS417_26620	0.15	-1.2
5,753,398	+		PS417_26620	0.15	+0.4
5,753,398	+		PS417_26620	0.15	-1.9
5,753,398	+		PS417_26620	0.15	-1.5
5,753,399	-		PS417_26620	0.15	-1.0
5,753,399	-				-0.4
5,753,399	-		PS417_26620	0.15	+0.3
5,753,404	+		PS417_26620	0.15	-0.8
5,753,857	+		PS417_26620	0.42	+0.1
5,753,857	+		PS417_26620	0.42	-1.0
5,753,858	-		PS417_26620	0.42	-0.2
5,753,858	-		PS417_26620	0.42	+1.0
5,753,858	-		PS417_26620	0.42	-0.4
5,754,010	-		PS417_26620	0.52	+1.1
5,754,158	-		PS417_26620	0.60	-0.0
5,754,158	-		PS417_26620	0.60	+0.0
5,754,333	-		PS417_26620	0.71	+0.2
5,754,333	-		PS417_26620	0.71	+0.4
5,754,406	+		PS417_26620	0.75	-0.0
5,754,407	-		PS417_26620	0.75	+1.1
5,754,418	+		PS417_26620	0.76	+2.5
5,754,418	+		PS417_26620	0.76	+1.6
5,754,418	+		PS417_26620	0.76	+0.1
5,754,418	+		PS417_26620	0.76	-2.1
5,754,418	+		PS417_26620	0.76	+0.1
5,754,418	+		PS417_26620	0.76	-0.3
5,754,419	-		PS417_26620	0.76	-0.1
5,754,419	-		PS417_26620	0.76	+0.8
5,754,419	-		PS417_26620	0.76	+0.5
5,754,419	-		PS417_26620	0.76	+0.1
5,754,419	-		PS417_26620	0.76	+0.7
5,754,419	-		PS417_26620	0.76	+0.3
5,754,419	-		PS417_26620	0.76	-2.6
5,754,423	-		PS417_26620	0.76	+1.3
5,754,657	+				+0.6
5,754,658	-				+0.0
5,754,737	-				-0.3
5,754,850	+				+1.1
5,754,851	-				-0.8
5,754,855	+				-0.2
5,754,855	+				+0.4
5,754,856	-				+0.8
5,754,966	+				+1.1
5,754,967	-				+0.1
5,755,036	+		PS417_26625	0.12	-0.1
5,755,037	-		PS417_26625	0.12	+1.0
5,755,083	+		PS417_26625	0.23	+0.3
5,755,083	+		PS417_26625	0.23	-2.7
5,755,083	+		PS417_26625	0.23	+1.6
5,755,084	-		PS417_26625	0.23	-0.4
5,755,092	+		PS417_26625	0.25	-1.7
5,755,093	-		PS417_26625	0.25	-1.9
5,755,162	+		PS417_26625	0.41	-0.5
5,755,162	+		PS417_26625	0.41	+1.1
5,755,254	+		PS417_26625	0.62	-0.2
5,755,254	+		PS417_26625	0.62	-1.4
5,755,254	+		PS417_26625	0.62	+3.9
5,755,255	-		PS417_26625	0.63	+1.3
5,755,255	-		PS417_26625	0.63	+0.8
5,755,255	-		PS417_26625	0.63	-0.8
5,755,255	-		PS417_26625	0.63	+0.2
5,755,283	+		PS417_26625	0.69	+0.7
5,755,403	+				+1.7
5,755,597	+		PS417_26630	0.34	-1.8
5,755,597	+		PS417_26630	0.34	-0.5
5,755,597	+		PS417_26630	0.34	-0.9
5,755,629	+		PS417_26630	0.40	+0.2
5,755,629	+		PS417_26630	0.40	-1.4
5,755,629	+		PS417_26630	0.40	-0.7
5,755,629	+		PS417_26630	0.40	-1.4
5,755,713	+		PS417_26630	0.53	+0.3
5,755,713	+		PS417_26630	0.53	-0.4
5,755,774	+		PS417_26630	0.63	-0.8
5,755,801	+		PS417_26630	0.67	-1.4
5,755,802	-		PS417_26630	0.67	-1.0