Strain Fitness in Pseudomonas simiae WCS417 around PS417_26070

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,632,198	+		PS417_26060	0.52	-0.7
5,632,480	+				-0.0
5,632,480	+				+0.5
5,632,480	+				-2.6
5,632,480	+				-0.5
5,632,481	-				+0.7
5,632,533	+				+0.4
5,632,533	+				-0.7
5,632,534	-				+0.4
5,632,681	+				-0.4
5,632,682	-				+0.5
5,632,858	+		PS417_26065	0.43	-1.3
5,632,859	-		PS417_26065	0.43	-0.4
5,632,859	-		PS417_26065	0.43	+0.1
5,632,888	+		PS417_26065	0.49	-0.4
5,632,888	+		PS417_26065	0.49	+1.5
5,633,023	+		PS417_26065	0.75	-1.0
5,633,024	-		PS417_26065	0.75	+1.5
5,633,025	+		PS417_26065	0.75	-0.4
5,633,026	-		PS417_26065	0.75	+0.3
5,633,126	-				-0.6
5,633,469	+		PS417_26070	0.32	+0.6
5,633,469	+		PS417_26070	0.32	-2.5
5,633,469	+		PS417_26070	0.32	-0.4
5,633,670	+		PS417_26070	0.52	+0.2
5,633,670	+		PS417_26070	0.52	+0.0
5,633,671	-		PS417_26070	0.52	-0.4
5,633,674	+		PS417_26070	0.53	-2.9
5,633,675	-		PS417_26070	0.53	-0.8
5,633,675	-		PS417_26070	0.53	-0.2
5,634,135	-				+0.5
5,634,135	-				+1.0
5,634,204	+				-1.6
5,634,223	-				-0.0
5,634,240	+				-0.8
5,634,241	-				+1.8
5,634,241	-				+1.9
5,634,241	-				-1.0
5,634,292	-				+0.4
5,634,377	+				-2.0
5,634,515	-				-1.1
5,634,982	+		PS417_26075	0.26	-0.0
5,634,982	+		PS417_26075	0.26	-1.1
5,634,983	-		PS417_26075	0.26	-0.2