Strain Fitness in Pseudomonas simiae WCS417 around PS417_26055

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,628,914	+		PS417_26045	0.60	-0.6
5,628,927	+		PS417_26045	0.63	-0.5
5,628,928	-		PS417_26045	0.64	+1.0
5,628,928	-		PS417_26045	0.64	+2.3
5,628,931	+		PS417_26045	0.64	-1.1
5,628,932	-		PS417_26045	0.64	-0.3
5,628,932	-		PS417_26045	0.64	-0.0
5,628,955	+		PS417_26045	0.70	-0.6
5,628,955	+		PS417_26045	0.70	-0.7
5,628,956	-		PS417_26045	0.70	+0.3
5,628,958	+		PS417_26045	0.70	-1.9
5,628,959	-		PS417_26045	0.70	+1.1
5,629,026	-		PS417_26045	0.86	+0.2
5,629,071	+				-0.0
5,629,071	+				+0.9
5,629,090	-				-2.0
5,629,094	+				+2.0
5,629,095	-				+0.8
5,629,197	+				-3.3
5,629,354	+		PS417_26050	0.31	-0.4
5,629,388	+		PS417_26050	0.38	-0.0
5,629,388	+		PS417_26050	0.38	-0.5
5,629,388	+		PS417_26050	0.38	-2.4
5,629,389	-		PS417_26050	0.38	+0.5
5,629,389	-		PS417_26050	0.38	-2.9
5,629,389	-		PS417_26050	0.38	+0.7
5,629,389	-		PS417_26050	0.38	-2.0
5,629,592	+		PS417_26050	0.84	-0.5
5,629,663	+				-3.7
5,629,663	+				-1.0
5,629,664	-				-0.0
5,629,682	-				+2.1
5,629,682	-				+2.2
5,629,682	-				+1.9
5,629,682	-				+2.6
5,629,682	-				+3.5
5,629,768	-				+1.2
5,629,784	-				+3.2
5,629,791	+				-2.5
5,629,830	-				+1.9
5,629,830	-				+2.3
5,629,830	-				+2.4
5,629,835	+				-2.1
5,629,835	+				-2.9
5,629,835	+				-1.6
5,629,836	-				+3.7
5,629,908	+				-2.0
5,629,908	+				+1.0
5,629,914	+				+0.8
5,629,914	+				+0.4
5,629,963	-				+2.4
5,630,054	+				+0.0
5,630,055	-				+2.5
5,630,062	+				+2.7
5,630,062	+				+0.4
5,630,062	+				-0.6
5,630,062	+				-0.8
5,630,063	-				+2.4
5,630,063	-				+2.1
5,630,063	-				+2.3
5,630,063	-				+2.6
5,630,116	+		PS417_26055	0.11	-1.5
5,630,116	+		PS417_26055	0.11	+0.4
5,630,116	+				+0.5
5,630,116	+		PS417_26055	0.11	+0.5
5,630,116	+		PS417_26055	0.11	-0.8
5,630,117	-		PS417_26055	0.11	+2.3
5,630,117	-		PS417_26055	0.11	+2.2
5,630,117	-		PS417_26055	0.11	+2.2
5,630,117	-		PS417_26055	0.11	+2.2
5,630,117	-		PS417_26055	0.11	+2.6
5,630,414	-		PS417_26055	0.26	+2.2
5,630,637	+		PS417_26055	0.38	-0.0
5,630,637	+		PS417_26055	0.38	+0.2
5,630,637	+		PS417_26055	0.38	-0.6
5,630,638	-		PS417_26055	0.38	+1.9
5,630,638	-		PS417_26055	0.38	+1.8
5,630,638	-		PS417_26055	0.38	+1.5
5,630,638	-		PS417_26055	0.38	+2.6
5,630,638	-		PS417_26055	0.38	+3.4
5,630,638	-		PS417_26055	0.38	+1.8
5,630,638	-		PS417_26055	0.38	+3.0
5,630,638	-		PS417_26055	0.38	+1.0
5,630,757	-		PS417_26055	0.44	+2.0
5,630,931	+		PS417_26055	0.53	+0.8
5,630,932	-		PS417_26055	0.53	+1.8
5,631,055	+		PS417_26055	0.60	+1.0
5,631,055	+		PS417_26055	0.60	+1.0
5,631,056	-		PS417_26055	0.60	+1.8
5,631,056	-		PS417_26055	0.60	+1.8
5,631,304	+		PS417_26055	0.73	+0.2
5,631,304	+		PS417_26055	0.73	-0.2
5,631,304	+		PS417_26055	0.73	-0.8
5,631,304	+		PS417_26055	0.73	-1.0
5,631,305	-		PS417_26055	0.73	+1.2
5,631,305	-		PS417_26055	0.73	+1.3
5,631,305	-		PS417_26055	0.73	+1.7
5,631,305	-		PS417_26055	0.73	+1.8
5,631,461	+		PS417_26055	0.81	+0.3
5,631,462	-		PS417_26055	0.81	+0.2
5,631,562	-		PS417_26055	0.86	+0.1
5,631,641	-				-2.5
5,631,660	+				-0.6
5,631,852	-				+0.3
5,632,000	+		PS417_26060	0.24	+0.0
5,632,198	+		PS417_26060	0.52	-0.7
5,632,480	+				-0.0
5,632,480	+				+0.5
5,632,480	+				-2.6
5,632,480	+				-0.5
5,632,481	-				+0.7
5,632,533	+				+0.4
5,632,533	+				-0.7
5,632,534	-				+0.4
5,632,681	+				-0.4
5,632,682	-				+0.5