Strain Fitness in Pseudomonas simiae WCS417 around PS417_25960

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,606,433	+		PS417_25955	0.21	+0.5
5,606,434	-		PS417_25955	0.21	+0.5
5,606,434	-		PS417_25955	0.21	+0.2
5,606,680	-		PS417_25955	0.49	-2.3
5,606,680	-		PS417_25955	0.49	-1.3
5,606,721	+		PS417_25955	0.53	-0.9
5,606,722	-		PS417_25955	0.53	-2.1
5,606,722	-		PS417_25955	0.53	-0.3
5,606,722	-		PS417_25955	0.53	+2.3
5,606,735	-		PS417_25955	0.55	+0.7
5,606,890	+		PS417_25955	0.72	-0.1
5,606,890	+		PS417_25955	0.72	-1.5
5,607,233	+				-0.9
5,607,233	+				+0.2
5,607,234	-				-0.4
5,607,283	+				-1.3
5,607,283	+				+0.5
5,607,284	-				-0.4
5,607,284	-				+0.7
5,607,337	+				-0.1
5,607,338	-				+1.7
5,607,338	-				+0.1
5,607,349	+				-2.7
5,607,350	-				+1.5
5,607,368	+				-0.4
5,607,368	+				-0.5
5,607,491	+				+1.6
5,607,491	+				+0.7
5,607,492	-				+0.9
5,607,548	+		PS417_25960	0.10	+0.3
5,607,548	+		PS417_25960	0.10	-3.2
5,607,549	-		PS417_25960	0.10	+0.7
5,607,549	-		PS417_25960	0.10	-2.2
5,607,554	+		PS417_25960	0.11	-0.5
5,607,555	-		PS417_25960	0.11	+0.1
5,607,555	-		PS417_25960	0.11	+1.5
5,607,563	+		PS417_25960	0.11	-2.7
5,607,563	+		PS417_25960	0.11	-0.2
5,607,563	+		PS417_25960	0.11	-0.6
5,607,581	+		PS417_25960	0.12	-1.4
5,607,750	+		PS417_25960	0.22	-1.4
5,607,751	-		PS417_25960	0.22	-0.9
5,607,751	-		PS417_25960	0.22	-0.8
5,607,751	-		PS417_25960	0.22	-0.0
5,607,752	+		PS417_25960	0.22	+0.5
5,607,752	+		PS417_25960	0.22	-1.1
5,607,752	+		PS417_25960	0.22	+1.8
5,607,752	+		PS417_25960	0.22	-0.6
5,607,753	-		PS417_25960	0.22	-0.7
5,607,753	-		PS417_25960	0.22	-0.5
5,607,753	-		PS417_25960	0.22	+2.1
5,607,753	-		PS417_25960	0.22	-0.8
5,607,824	+		PS417_25960	0.26	-1.2
5,607,824	+		PS417_25960	0.26	+0.7
5,607,824	+		PS417_25960	0.26	+0.7
5,607,825	-		PS417_25960	0.26	+1.2
5,608,193	+		PS417_25960	0.46	-0.6
5,608,194	-		PS417_25960	0.46	-0.5
5,608,262	+		PS417_25960	0.50	-1.3
5,608,262	+		PS417_25960	0.50	-1.5
5,608,310	-		PS417_25960	0.53	-1.2
5,608,405	-		PS417_25960	0.58	-0.8
5,608,551	+		PS417_25960	0.67	-1.1
5,608,577	+		PS417_25960	0.68	+0.0
5,608,680	-		PS417_25960	0.74	+1.9
5,608,764	-		PS417_25960	0.79	-0.3
5,608,887	-		PS417_25960	0.85	-0.4
5,608,887	-		PS417_25960	0.85	-0.5
5,609,027	-				-0.4
5,609,115	+				-1.1
5,609,135	+				+1.6
5,609,136	-				-0.4
5,609,193	+				+0.4
5,609,346	+				+1.8
5,609,347	-				+0.1
5,609,370	-				-1.3
5,609,370	-				+0.0
5,609,453	+		PS417_25965	0.10	+1.7
5,609,454	-		PS417_25965	0.10	-0.6
5,609,454	-		PS417_25965	0.10	-1.9
5,609,468	+		PS417_25965	0.11	-1.1
5,609,477	+		PS417_25965	0.12	-1.4
5,609,478	-		PS417_25965	0.12	-0.6
5,609,478	-		PS417_25965	0.12	-0.8
5,609,486	+		PS417_25965	0.12	+0.3
5,609,486	+		PS417_25965	0.12	+0.8
5,609,487	-		PS417_25965	0.12	+2.1
5,609,594	+		PS417_25965	0.18	+1.0
5,609,594	+		PS417_25965	0.18	-0.3
5,609,594	+		PS417_25965	0.18	-0.2
5,609,595	-		PS417_25965	0.18	-1.2
5,609,595	-		PS417_25965	0.18	-2.6
5,609,595	-		PS417_25965	0.18	+0.2
5,609,684	-		PS417_25965	0.23	-0.4
5,609,684	-		PS417_25965	0.23	+0.2
5,609,684	-		PS417_25965	0.23	-0.5
5,609,735	+		PS417_25965	0.26	+0.5
5,609,735	+		PS417_25965	0.26	+0.2
5,609,735	+		PS417_25965	0.26	-0.7
5,609,735	+		PS417_25965	0.26	-0.8
5,609,736	-		PS417_25965	0.26	+0.7
5,609,736	-		PS417_25965	0.26	-1.9
5,609,736	-		PS417_25965	0.26	+2.1
5,609,736	-		PS417_25965	0.26	-0.6
5,609,793	-		PS417_25965	0.30	+0.3
5,609,793	-		PS417_25965	0.30	+1.9
5,609,793	-		PS417_25965	0.30	-0.6
5,609,960	+		PS417_25965	0.39	+0.9
5,609,961	-		PS417_25965	0.39	+0.4
5,610,104	+		PS417_25965	0.47	-0.3