Strain Fitness in Pseudomonas simiae WCS417 around PS417_25900

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,593,678	+				-0.7
5,593,679	-				-1.3
5,593,936	-				+0.5
5,593,936	-				+2.0
5,593,982	+				-1.6
5,594,487	-		PS417_25895	0.85	-0.5
5,594,514	-				-0.2
5,594,514	-				-4.4
5,594,573	+				+0.5
5,594,573	+				+1.1
5,594,573	+				+1.5
5,594,573	+				-0.5
5,594,574	-				-0.1
5,594,574	-				-0.5
5,594,574	-				+3.1
5,594,588	+				-0.8
5,595,129	+		PS417_25900	0.54	+0.9
5,595,222	+		PS417_25900	0.64	+1.3
5,595,222	+		PS417_25900	0.64	+2.5
5,595,222	+		PS417_25900	0.64	-1.0
5,595,223	-		PS417_25900	0.64	+0.8
5,595,223	-		PS417_25900	0.64	+0.4
5,595,223	-		PS417_25900	0.64	-0.2
5,595,223	-		PS417_25900	0.64	+0.3
5,595,292	-		PS417_25900	0.72	-3.4
5,595,292	-		PS417_25900	0.72	-0.4
5,595,530	+				+0.8
5,595,530	+				-0.7
5,595,777	+		PS417_25905	0.46	+0.6
5,595,778	-		PS417_25905	0.46	-1.2
5,595,882	+		PS417_25905	0.69	-0.1
5,595,883	-		PS417_25905	0.69	+0.6
5,596,120	+				-0.1
5,596,121	-				-0.2
5,596,121	-				+0.8
5,596,122	+				-0.7
5,596,123	-				-0.8
5,596,407	-		PS417_25910	0.13	+1.1
5,596,407	-		PS417_25910	0.13	-0.8
5,596,517	+		PS417_25910	0.20	+0.3
5,596,518	-		PS417_25910	0.20	-3.3
5,596,518	-		PS417_25910	0.20	-0.9
5,596,523	+		PS417_25910	0.20	-0.5