Strain Fitness in Pseudomonas simiae WCS417 around PS417_25290

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,476,228	+				+0.2
5,476,230	+				+2.1
5,476,230	+				-0.4
5,476,230	+				-2.0
5,476,231	-				-0.1
5,476,231	-				+0.7
5,476,231	-				+0.5
5,476,231	-				-0.8
5,476,250	+				-1.3
5,476,250	+				+3.5
5,476,283	+				+4.7
5,476,283	+				+1.9
5,476,427	+		PS417_25285	0.19	+0.7
5,476,427	+		PS417_25285	0.19	+0.2
5,476,428	-		PS417_25285	0.19	-0.5
5,476,602	+		PS417_25285	0.39	-0.2
5,476,602	+		PS417_25285	0.39	-1.0
5,476,602	+		PS417_25285	0.39	-0.5
5,476,602	+		PS417_25285	0.39	-0.5
5,476,603	-		PS417_25285	0.39	-1.5
5,476,603	-		PS417_25285	0.39	-0.8
5,476,603	-		PS417_25285	0.39	+0.0
5,476,603	-		PS417_25285	0.39	+0.6
5,476,603	-		PS417_25285	0.39	-0.3
5,476,603	-		PS417_25285	0.39	+0.6
5,476,603	-		PS417_25285	0.39	+0.4
5,476,603	-		PS417_25285	0.39	-0.8
5,476,718	-		PS417_25285	0.52	-0.3
5,476,941	-		PS417_25285	0.77	-0.7
5,477,027	+		PS417_25285	0.87	+0.1
5,477,118	+				-0.9
5,477,118	+				-0.6
5,477,119	-				+1.2
5,477,132	+				+0.0
5,477,135	+				+1.5
5,477,153	+				-0.5
5,477,153	+				+0.0
5,477,323	+		PS417_25290	0.54	-3.1
5,477,324	-		PS417_25290	0.55	-0.6
5,477,324	-		PS417_25290	0.55	-2.7
5,477,489	-				-1.1
5,477,572	-				-1.3
5,477,894	-		PS417_25295	0.47	-0.1
5,477,894	-		PS417_25295	0.47	-0.1
5,478,054	-		PS417_25295	0.73	-0.5