Strain Fitness in Pseudomonas simiae WCS417 around PS417_25040

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,430,118	+				-2.1
5,430,160	-				-0.2
5,430,179	+				+0.0
5,430,179	+				-0.1
5,430,234	+				-0.7
5,430,255	+				-0.3
5,430,331	+				+0.0
5,430,331	+				+1.3
5,430,332	-				-0.3
5,430,332	-				+1.3
5,430,332	-				-2.0
5,430,390	+				+0.1
5,430,390	+				-0.8
5,430,391	-				+0.5
5,430,409	+				+0.4
5,430,409	+				+0.2
5,430,467	+				-0.2
5,430,467	+				+1.3
5,430,467	+				-0.3
5,430,468	-				+0.4
5,430,468	-				-0.4
5,430,485	+				-0.9
5,430,492	-				-0.6
5,430,506	-				-0.7
5,430,550	+				-0.4
5,430,550	+				-0.1
5,430,551	-				-1.6
5,430,624	+				-0.2
5,430,627	+				+0.5
5,430,628	-				+0.5
5,430,736	+				+0.0
5,430,781	+				-0.5
5,430,782	-				-2.2
5,430,782	-				+1.5
5,430,796	+				-0.7
5,430,796	+				+0.5
5,430,952	+				+0.9
5,430,952	+				+1.7
5,430,953	-				-1.0
5,430,953	-				+0.9
5,430,953	-				-0.1
5,430,954	+				+0.8
5,430,955	-				+0.0
5,430,955	-				+0.4
5,430,955	-				-0.6
5,430,961	-				+0.5
5,431,062	+				-2.2
5,431,062	+		PS417_25040	0.18	-0.0
5,431,062	+		PS417_25040	0.18	-0.1
5,431,063	-		PS417_25040	0.18	-1.6
5,431,063	-		PS417_25040	0.18	-2.4
5,431,063	-		PS417_25040	0.18	-0.7
5,431,063	-		PS417_25040	0.18	-1.5
5,431,063	-		PS417_25040	0.18	-0.8
5,431,071	+		PS417_25040	0.22	-1.3
5,431,071	+		PS417_25040	0.22	-0.6
5,431,071	+		PS417_25040	0.22	+0.5
5,431,072	-		PS417_25040	0.22	+0.3
5,431,072	-		PS417_25040	0.22	-1.3
5,431,175	+		PS417_25040	0.62	-0.6
5,431,184	+		PS417_25040	0.66	-0.4
5,431,264	+				+1.1
5,431,286	+				+1.1
5,431,286	+				-0.6
5,431,286	+				+0.3
5,431,287	-				+0.2
5,431,287	-				-0.8
5,431,287	-				+0.1
5,431,373	+		PS417_25045	0.29	+2.4
5,431,373	+		PS417_25045	0.29	-2.9
5,431,373	+		PS417_25045	0.29	-0.2
5,431,373	+		PS417_25045	0.29	+0.1
5,431,374	-		PS417_25045	0.30	-0.4
5,431,374	-		PS417_25045	0.30	-2.5
5,431,374	-		PS417_25045	0.30	-0.3
5,431,375	+		PS417_25045	0.30	+0.5
5,431,375	+		PS417_25045	0.30	-0.8
5,431,470	+		PS417_25045	0.62	+1.7
5,431,470	+		PS417_25045	0.62	+2.1
5,431,471	-		PS417_25045	0.62	+0.8
5,431,471	-		PS417_25045	0.62	+1.6
5,431,485	+		PS417_25045	0.67	+0.6
5,431,486	-		PS417_25045	0.67	-0.1
5,431,486	-		PS417_25045	0.67	+0.3
5,431,525	+		PS417_25045	0.80	+0.9
5,431,526	-		PS417_25045	0.80	+0.1
5,431,526	-		PS417_25045	0.80	+1.0
5,431,559	+				+0.2
5,431,559	+				+0.4
5,431,611	+				+0.2
5,431,612	-				-0.4
5,431,628	+				-0.2
5,431,628	+				-0.2
5,431,629	-				+0.1
5,431,629	-				+2.6
5,431,697	+				-2.1
5,431,697	+				+1.0
5,431,698	-				-1.2
5,431,698	-				+0.5
5,431,775	+				-0.7
5,431,838	+				+1.5
5,431,867	-				-1.3
5,431,951	-				+0.2
5,431,951	-				-0.9
5,431,967	+				-0.9
5,431,967	+				+1.6
5,431,980	+				-0.3
5,431,980	+				+0.8
5,432,102	+				+0.2
5,432,234	+				-0.6
5,432,234	+				+0.2
5,432,235	-				+0.6
5,432,257	+				-0.6
5,432,257	+				-2.1
5,432,264	+				-1.5
5,432,264	+				+0.6