Strain Fitness in Pseudomonas simiae WCS417 around PS417_24290

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,271,551	-		PS417_24285	0.13	-1.1
5,271,786	+		PS417_24285	0.38	+1.5
5,271,786	+		PS417_24285	0.38	-1.8
5,271,786	+		PS417_24285	0.38	-0.5
5,271,787	-		PS417_24285	0.38	-0.3
5,271,787	-		PS417_24285	0.38	-1.1
5,271,787	-		PS417_24285	0.38	-2.9
5,272,021	+		PS417_24285	0.62	+0.8
5,272,021	+		PS417_24285	0.62	+1.2
5,272,022	-		PS417_24285	0.62	-0.5
5,272,151	-		PS417_24285	0.76	-0.1
5,272,402	-				-0.3
5,272,402	-				-0.1
5,272,455	+				+0.5
5,272,455	+				+1.5
5,272,455	+				-0.1
5,272,469	+				-2.1
5,272,469	+				-0.7
5,272,469	+				-0.1
5,272,470	-				+1.2
5,272,470	-				+0.7
5,272,470	-				-2.0
5,272,470	-				-1.1
5,272,470	-				-2.8
5,272,554	-				-2.0
5,272,610	-		PS417_24290	0.34	-1.6
5,272,610	-		PS417_24290	0.34	-0.0
5,272,646	+		PS417_24290	0.53	-0.9
5,272,657	+		PS417_24290	0.58	-1.7
5,272,657	+		PS417_24290	0.58	-1.0
5,272,657	+		PS417_24290	0.58	-1.9
5,272,658	-		PS417_24290	0.59	-0.1
5,272,791	-				+0.8
5,272,840	+				-0.5
5,272,840	+				-0.8
5,272,897	+				+0.3
5,272,978	+		PS417_24295	0.11	-0.1
5,273,093	+		PS417_24295	0.16	+0.3
5,273,094	-		PS417_24295	0.16	+1.1
5,273,095	+		PS417_24295	0.16	+0.3
5,273,645	-		PS417_24295	0.43	-0.3
5,273,728	+		PS417_24295	0.47	-1.4