Strain Fitness in Pseudomonas simiae WCS417 around PS417_24280

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,269,094	+		PS417_24275	0.81	+0.5
5,269,094	+		PS417_24275	0.81	+2.1
5,269,095	-		PS417_24275	0.81	+1.5
5,269,322	-		PS417_24275	0.87	-3.8
5,269,743	-				-5.8
5,269,995	+				-0.1
5,269,996	-				+0.7
5,269,996	-				+0.0
5,270,004	+				-0.3
5,270,004	+				-0.8
5,271,330	+				-0.8
5,271,361	+				-0.6
5,271,362	-				+0.8
5,271,551	-		PS417_24285	0.13	-1.1
5,271,786	+		PS417_24285	0.38	+1.5
5,271,786	+		PS417_24285	0.38	-1.8
5,271,786	+		PS417_24285	0.38	-0.5
5,271,787	-		PS417_24285	0.38	-0.3
5,271,787	-		PS417_24285	0.38	-1.1
5,271,787	-		PS417_24285	0.38	-2.9
5,272,021	+		PS417_24285	0.62	+0.8
5,272,021	+		PS417_24285	0.62	+1.2
5,272,022	-		PS417_24285	0.62	-0.5
5,272,151	-		PS417_24285	0.76	-0.1