Strain Fitness in Pseudomonas simiae WCS417 around PS417_23935

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,180,638	+		PS417_23930	0.57	-0.4
5,180,639	-		PS417_23930	0.57	+1.1
5,180,641	+		PS417_23930	0.58	-0.5
5,180,642	-		PS417_23930	0.58	+0.7
5,180,642	-		PS417_23930	0.58	-1.4
5,180,642	-		PS417_23930	0.58	+1.5
5,180,642	-		PS417_23930	0.58	+0.1
5,180,642	-		PS417_23930	0.58	+0.8
5,180,741	+				-0.1
5,180,741	+		PS417_23930	0.69	+0.2
5,181,021	+				-0.2
5,181,021	+				+0.7
5,181,021	+				-0.1
5,181,021	+				-1.2
5,181,022	-				-2.1
5,181,022	-				+0.1
5,181,022	-				+0.5
5,181,028	+				+1.5
5,181,222	-		PS417_23935	0.15	+1.6
5,181,370	+		PS417_23935	0.30	+1.9
5,181,371	-		PS417_23935	0.30	+0.1
5,181,371	-		PS417_23935	0.30	+0.5
5,181,404	+		PS417_23935	0.33	+1.5
5,181,544	+		PS417_23935	0.47	-0.4
5,181,546	+		PS417_23935	0.47	-0.2
5,181,691	+		PS417_23935	0.61	+2.1
5,181,692	-		PS417_23935	0.61	-0.4
5,181,761	-		PS417_23935	0.68	-0.4
5,181,785	-		PS417_23935	0.71	+0.1
5,182,081	+				-0.4
5,182,081	+				-1.9
5,182,131	-				-0.1
5,182,155	+				-2.7
5,182,155	+				+0.2
5,182,155	+				-0.8
5,182,155	+				-0.2
5,182,155	+				-0.5
5,182,155	+				+0.5
5,182,156	-				-1.2
5,182,156	-				-0.3
5,182,156	-				-0.5
5,182,225	+				-0.7
5,182,226	-				-1.8
5,182,294	+				-0.3
5,182,467	+		PS417_23940	0.10	-1.2
5,182,468	-		PS417_23940	0.10	+1.2
5,182,468	-		PS417_23940	0.10	+1.8
5,182,469	+		PS417_23940	0.10	-0.7
5,182,469	+		PS417_23940	0.10	+0.1
5,182,469	+		PS417_23940	0.10	-1.7
5,182,469	+		PS417_23940	0.10	+0.3
5,182,469	+		PS417_23940	0.10	+0.8
5,182,469	+		PS417_23940	0.10	-0.8
5,182,469	+		PS417_23940	0.10	+0.5
5,182,469	+		PS417_23940	0.10	-0.2
5,182,469	+		PS417_23940	0.10	-0.8
5,182,470	-		PS417_23940	0.10	+0.3
5,182,470	-		PS417_23940	0.10	+0.2
5,182,470	-		PS417_23940	0.10	+1.0
5,182,470	-		PS417_23940	0.10	+0.7
5,182,470	-		PS417_23940	0.10	+0.8
5,182,470	-		PS417_23940	0.10	+1.0
5,182,470	-		PS417_23940	0.10	+1.9
5,182,470	-		PS417_23940	0.10	+2.2
5,182,601	+				+0.7
5,182,628	-		PS417_23940	0.16	+1.9
5,182,710	+		PS417_23940	0.18	-0.2
5,182,861	+		PS417_23940	0.24	-0.5
5,182,861	+		PS417_23940	0.24	-0.1
5,182,862	-		PS417_23940	0.24	+0.2
5,182,866	-		PS417_23940	0.24	-1.1