Strain Fitness in Pseudomonas simiae WCS417 around PS417_23590

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,101,489	+				-1.0
5,101,489	+				-0.1
5,101,506	-				-0.8
5,101,593	+				+0.9
5,101,593	+				+0.3
5,101,594	-				+0.9
5,101,725	+				+0.7
5,101,725	+				+0.3
5,101,726	-				-1.3
5,101,726	-				-0.6
5,101,726	-				+1.5
5,101,741	-				-0.5
5,101,741	-				+0.9
5,101,746	+				-0.3
5,101,747	-				-0.2
5,101,772	+				-0.3
5,101,875	+				+0.1
5,101,878	+				+0.4
5,101,925	+				-0.0
5,101,926	-				-0.1
5,101,928	+				-0.7
5,101,928	+				-1.3
5,101,929	-				-0.1
5,102,033	+				-1.2
5,102,053	+				-1.1
5,102,473	+		PS417_23590	0.65	-0.6
5,102,474	-		PS417_23590	0.66	-0.5
5,102,474	-		PS417_23590	0.66	-0.3
5,102,536	+		PS417_23590	0.82	-1.5
5,102,633	+				-1.0
5,102,633	+				-0.0
5,102,634	-				+1.5
5,102,634	-				+3.3
5,102,715	+				-0.1
5,102,716	-				-0.5
5,102,750	-				-1.0
5,102,750	-				-0.8
5,103,076	-		PS417_23595	0.30	-0.8
5,103,095	+		PS417_23595	0.32	-1.1
5,103,252	+		PS417_23595	0.42	+0.2
5,103,322	+		PS417_23595	0.47	-1.1
5,103,364	+		PS417_23595	0.50	+0.8
5,103,456	+		PS417_23595	0.56	-0.1
5,103,457	-		PS417_23595	0.56	-2.2