Strain Fitness in Pseudomonas simiae WCS417 around PS417_23105

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
5,007,634	+				+0.2
5,007,635	-				-0.5
5,007,635	-				+0.4
5,007,664	+				-0.6
5,007,665	-				+0.0
5,007,683	+				-0.3
5,007,683	+				-0.1
5,007,683	+				-0.2
5,007,683	+				+4.4
5,007,683	+				+0.3
5,007,684	-				-1.4
5,007,684	-				-0.4
5,007,684	-				-1.6
5,007,863	-		PS417_23100	0.30	-0.7
5,007,863	-		PS417_23100	0.30	-0.1
5,007,903	-		PS417_23100	0.34	-0.4
5,008,013	+		PS417_23100	0.48	+1.9
5,008,211	+		PS417_23100	0.72	+0.1
5,008,211	+		PS417_23100	0.72	+0.1
5,008,212	-		PS417_23100	0.72	-0.3
5,008,212	-		PS417_23100	0.72	-0.4
5,008,369	+				-0.8
5,008,695	+		PS417_23105	0.66	-1.3
5,008,746	+		PS417_23105	0.88	-1.6
5,008,795	+				-0.1
5,009,106	+		PS417_23110	0.20	-0.0
5,009,106	+		PS417_23110	0.20	+0.8
5,009,152	+		PS417_23110	0.23	+0.9
5,009,152	+		PS417_23110	0.23	-0.1
5,009,434	+		PS417_23110	0.40	+0.4
5,009,434	+		PS417_23110	0.40	+0.5
5,009,434	+		PS417_23110	0.40	+0.6
5,009,435	-		PS417_23110	0.40	-2.3
5,009,435	-		PS417_23110	0.40	+1.3
5,009,435	-		PS417_23110	0.40	+1.0
5,009,466	+		PS417_23110	0.42	-0.6
5,009,466	+		PS417_23110	0.42	-1.6
5,009,641	+				+2.2
5,009,641	+		PS417_23110	0.52	-0.3
5,009,641	+		PS417_23110	0.52	+0.8
5,009,642	-		PS417_23110	0.52	-1.6
5,009,642	-		PS417_23110	0.52	+0.4
5,009,642	-		PS417_23110	0.52	+1.7
5,009,642	-		PS417_23110	0.52	-0.1