Strain Fitness in Pseudomonas simiae WCS417 around PS417_22555

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,883,234	+		PS417_22550	0.52	+0.2
4,883,613	+		PS417_22550	0.77	+1.4
4,883,973	-				-0.9
4,884,024	-				+0.5
4,884,032	+				+0.5
4,884,033	-				-0.8
4,884,033	-				-1.0
4,884,069	+				-3.0
4,884,128	+				-1.2
4,884,128	+				-0.9
4,884,128	+				+0.4
4,884,160	-				+0.9
4,884,238	+				-1.0
4,884,287	-				+0.2
4,884,347	+		PS417_22555	0.10	-0.3
4,884,348	-		PS417_22555	0.10	-1.2
4,884,538	+		PS417_22555	0.20	+0.7
4,884,539	-		PS417_22555	0.20	+0.2
4,884,539	-		PS417_22555	0.20	+0.8
4,884,583	+		PS417_22555	0.23	+0.7
4,884,584	-		PS417_22555	0.23	+0.6
4,884,584	-		PS417_22555	0.23	+3.1
4,884,584	-		PS417_22555	0.23	-1.5
4,884,584	-		PS417_22555	0.23	+2.0
4,884,586	-		PS417_22555	0.23	+2.7
4,884,586	-		PS417_22555	0.23	-0.3
4,884,660	-		PS417_22555	0.27	-0.2
4,884,730	+		PS417_22555	0.30	+0.2
4,884,767	+		PS417_22555	0.32	-0.3
4,884,809	+		PS417_22555	0.35	-0.2
4,884,809	+		PS417_22555	0.35	-1.6
4,884,809	+		PS417_22555	0.35	-0.5
4,884,810	-		PS417_22555	0.35	-0.6
4,884,877	-		PS417_22555	0.38	+0.9
4,884,890	+		PS417_22555	0.39	+0.8
4,885,048	-		PS417_22555	0.47	+1.0
4,885,129	-		PS417_22555	0.52	+1.7
4,885,197	+		PS417_22555	0.55	+1.7
4,885,197	+		PS417_22555	0.55	+1.4
4,885,197	+		PS417_22555	0.55	-0.2
4,885,198	-		PS417_22555	0.55	+1.5
4,885,512	+		PS417_22555	0.72	+1.2
4,885,513	-				-1.2
4,885,577	+		PS417_22555	0.75	+1.8
4,885,578	-		PS417_22555	0.75	+0.8
4,885,578	-		PS417_22555	0.75	+0.0
4,886,234	+				-1.0
4,886,235	-				+0.8
4,886,235	-				+2.0
4,886,262	-				+1.8
4,886,489	-		PS417_22565	0.22	-0.9