Strain Fitness in Pseudomonas simiae WCS417 around PS417_22305

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,829,400	-				-0.2
4,829,400	-				+0.8
4,829,402	+				+0.8
4,829,402	+				-0.3
4,829,403	-				-0.2
4,829,403	-				+1.7
4,829,403	-				+0.7
4,829,552	+				-1.0
4,829,634	+				+0.4
4,829,634	+				-1.5
4,829,933	-		PS417_22300	0.55	+0.9
4,830,139	+				+1.1
4,830,140	-				+0.2
4,830,293	+				-0.0
4,830,293	+				+1.2
4,830,294	-				-1.0
4,830,427	-		PS417_22305	0.16	+0.4
4,830,567	+		PS417_22305	0.27	-1.0
4,830,606	+		PS417_22305	0.29	+0.4
4,830,606	+		PS417_22305	0.29	+0.2
4,830,606	+		PS417_22305	0.29	+2.8
4,830,783	+		PS417_22305	0.43	+0.0
4,830,784	-		PS417_22305	0.43	-1.4
4,830,951	-		PS417_22305	0.55	+1.6
4,831,559	+				-0.6
4,831,559	+				+0.7
4,831,559	+				+5.4
4,831,559	+				-2.4
4,831,560	-				-0.5
4,831,560	-				-0.7
4,831,560	-				+0.8
4,831,560	-				+4.7
4,831,981	+		PS417_22310	0.29	+0.1
4,831,981	+		PS417_22310	0.29	+1.2
4,831,981	+		PS417_22310	0.29	+1.1
4,831,981	+		PS417_22310	0.29	-0.3
4,831,982	-		PS417_22310	0.29	+1.0
4,831,982	-		PS417_22310	0.29	+0.7
4,831,982	-		PS417_22310	0.29	-2.6
4,832,192	+		PS417_22310	0.45	+1.4
4,832,192	+		PS417_22310	0.45	+1.6
4,832,192	+		PS417_22310	0.45	-0.5
4,832,300	+		PS417_22310	0.53	-3.7
4,832,444	-		PS417_22310	0.63	-1.4
4,832,526	+		PS417_22310	0.69	-2.3