Strain Fitness in Pseudomonas simiae WCS417 around PS417_21645

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,693,561	+		PS417_21630	0.79	+0.4
4,693,761	+				+0.2
4,693,843	+				+0.8
4,693,844	-				-0.9
4,693,849	+				-0.6
4,693,849	+				+0.3
4,693,849	+				-0.2
4,693,849	+				-1.2
4,693,849	+				-0.6
4,693,860	+				+1.1
4,693,966	+				+0.4
4,693,966	+				+0.1
4,694,004	+				-1.2
4,694,004	+				+0.7
4,694,005	-				-0.4
4,694,084	+				+1.4
4,694,084	+				+0.5
4,694,084	+				+0.0
4,694,200	-				-1.4
4,694,200	-				+2.1
4,694,200	-				-1.2
4,694,252	-		PS417_21635	0.66	+1.4
4,694,877	-				+0.3
4,694,939	-				-0.1
4,694,955	-				-0.7
4,694,967	+				+1.4
4,694,967	+				-1.4
4,694,967	+				-0.6
4,694,968	-				+2.4
4,694,968	-				+0.9
4,694,972	-				-0.8
4,695,564	-		PS417_21655	0.41	-2.6
4,695,567	-		PS417_21655	0.42	-1.6