Strain Fitness in Pseudomonas simiae WCS417 around PS417_21220

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,614,139	+		PS417_21215	0.56	-1.4
4,614,140	-		PS417_21215	0.56	-2.0
4,614,351	-		PS417_21215	0.66	+0.7
4,614,526	-				-0.2
4,614,706	+		PS417_21215	0.83	+1.4
4,614,915	+				+1.5
4,615,067	+				-1.4
4,615,067	+				+0.1
4,615,067	+				-2.0
4,615,583	+		PS417_21220	0.40	-3.6
4,615,583	+		PS417_21220	0.40	-0.9
4,615,707	+		PS417_21220	0.51	-1.2
4,615,707	+		PS417_21220	0.51	-0.9
4,615,707	+		PS417_21220	0.51	-0.7
4,615,881	+		PS417_21220	0.65	-1.1
4,615,881	+				+1.0
4,615,882	-		PS417_21220	0.65	-0.1
4,616,340	-				+0.4
4,616,417	+				+1.9
4,616,417	+				-0.2
4,616,423	-				+0.4
4,616,423	-				+1.5
4,616,558	-				+4.0
4,616,558	-				+0.8
4,616,711	+				+0.3
4,616,727	+				+1.4
4,616,728	-				-0.1
4,616,728	-				-0.2
4,616,728	-				+1.4
4,616,728	-				+1.8
4,616,800	+				-2.5
4,616,801	-				+0.4
4,616,801	-				+0.4
4,617,118	+		PS417_21230	0.21	+0.6
4,617,119	-		PS417_21230	0.21	+0.7
4,617,119	-		PS417_21230	0.21	+0.5