Strain Fitness in Pseudomonas simiae WCS417 around PS417_21045

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,578,324	+		PS417_21040	0.63	+1.4
4,578,357	+		PS417_21040	0.65	-0.5
4,578,358	-		PS417_21040	0.65	+0.8
4,578,496	+		PS417_21040	0.73	+0.2
4,578,497	-		PS417_21040	0.73	+0.6
4,578,690	+		PS417_21040	0.83	+0.6
4,578,690	+		PS417_21040	0.83	-0.4
4,578,691	-		PS417_21040	0.83	+0.3
4,578,691	-		PS417_21040	0.83	+2.0
4,578,691	-		PS417_21040	0.83	-1.1
4,578,693	-		PS417_21040	0.83	+2.4
4,578,718	+		PS417_21040	0.85	+0.8
4,578,719	-		PS417_21040	0.85	-0.0
4,578,807	-		PS417_21040	0.89	+0.3
4,578,865	-				-0.2
4,578,909	-				+0.2
4,578,999	+				-0.3
4,578,999	+				-0.7
4,579,000	-				+0.1
4,579,028	+				+0.0
4,579,029	-				-1.8
4,579,029	-				+0.3
4,579,029	-				-0.0
4,579,276	+		PS417_21045	0.28	+1.4
4,579,276	+		PS417_21045	0.28	+1.5
4,579,276	+		PS417_21045	0.28	+0.3
4,579,277	-		PS417_21045	0.28	-0.9
4,579,277	-		PS417_21045	0.28	-1.3
4,579,277	-		PS417_21045	0.28	-0.5
4,579,314	+		PS417_21045	0.32	+0.6
4,579,315	-		PS417_21045	0.32	-1.1
4,579,315	-		PS417_21045	0.32	-0.8
4,579,315	-		PS417_21045	0.32	-0.6
4,579,315	-		PS417_21045	0.32	-0.1
4,579,315	-		PS417_21045	0.32	-0.6
4,579,346	-		PS417_21045	0.36	+0.7
4,579,438	-		PS417_21045	0.46	+1.1
4,579,539	+		PS417_21045	0.57	-0.6
4,579,539	+		PS417_21045	0.57	+0.4
4,579,540	-		PS417_21045	0.57	+0.1
4,579,571	+		PS417_21045	0.60	+0.6
4,579,897	-				+0.5
4,579,897	-				-0.9
4,579,915	-				-3.9
4,579,915	-				-0.7
4,579,915	-				-0.9
4,580,132	-		PS417_21050	0.16	-0.7
4,580,179	+		PS417_21050	0.21	-1.0
4,580,180	-		PS417_21050	0.21	+0.8
4,580,203	+		PS417_21050	0.23	+1.4
4,580,203	+		PS417_21050	0.23	+1.0
4,580,203	+		PS417_21050	0.23	+0.1
4,580,203	+		PS417_21050	0.23	-0.2
4,580,203	+		PS417_21050	0.23	+1.2
4,580,204	-		PS417_21050	0.23	-0.4
4,580,204	-		PS417_21050	0.23	-0.2
4,580,204	-		PS417_21050	0.23	-0.7
4,580,204	-		PS417_21050	0.23	-0.9
4,580,251	-		PS417_21050	0.28	-2.0
4,580,251	-		PS417_21050	0.28	-2.8
4,580,407	+		PS417_21050	0.44	-0.3
4,580,407	+		PS417_21050	0.44	+0.1
4,580,408	-		PS417_21050	0.44	+0.9
4,580,408	-		PS417_21050	0.44	+0.0
4,580,408	-		PS417_21050	0.44	-0.7
4,580,498	+		PS417_21050	0.53	+1.7
4,580,499	-		PS417_21050	0.53	+0.8
4,580,524	+		PS417_21050	0.56	-0.3
4,580,525	-		PS417_21050	0.56	-2.1
4,580,525	-		PS417_21050	0.56	-0.3
4,580,656	+		PS417_21050	0.69	+1.2
4,580,657	-		PS417_21050	0.69	-0.7
4,580,719	-		PS417_21050	0.75	+0.4