Strain Fitness in Pseudomonas simiae WCS417 around PS417_20800

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,517,647	-		PS417_20795	0.49	+0.3
4,517,726	+		PS417_20795	0.56	-0.1
4,518,101	+		PS417_20795	0.88	-0.4
4,518,215	+				+0.0
4,518,215	+				+0.4
4,518,216	-				+0.2
4,518,369	-				+0.7
4,518,369	-				-2.4
4,518,506	+		PS417_20800	0.23	-1.0
4,518,506	+		PS417_20800	0.23	-1.7
4,518,506	+		PS417_20800	0.23	+0.6
4,518,506	+		PS417_20800	0.23	+1.1
4,518,506	+		PS417_20800	0.23	+0.4
4,518,506	+		PS417_20800	0.23	-0.9
4,518,507	-		PS417_20800	0.23	-0.8
4,518,507	-		PS417_20800	0.23	-1.4
4,518,507	-		PS417_20800	0.23	-1.4
4,518,507	-		PS417_20800	0.23	-2.1
4,518,562	-		PS417_20800	0.32	-0.6
4,518,662	+		PS417_20800	0.49	+0.0
4,518,695	+		PS417_20800	0.54	-2.3
4,518,696	-		PS417_20800	0.55	-1.4
4,519,070	+				-1.1
4,519,071	-				-0.5
4,519,296	+				-2.2
4,519,389	+				-0.9
4,519,389	+				-0.4
4,519,389	+				+0.0
4,519,390	-				+0.8
4,519,390	-				-1.2
4,519,390	-				+0.9
4,519,390	-				-0.1
4,519,390	-				+0.4
4,519,390	-				+0.2
4,519,393	+				-0.2
4,519,393	+				-2.5
4,519,394	-				+0.8
4,519,481	+				+1.7
4,519,481	+				-1.3
4,519,481	+				-0.3
4,519,481	+				-0.3
4,519,482	-				+2.2
4,519,482	-				-1.0
4,519,641	+				+1.4
4,519,642	-				+3.4
4,519,642	-				-0.5
4,519,836	-				+0.0
4,519,863	+				-0.1
4,519,897	-				+0.8
4,519,914	+				+1.4
4,519,915	-				-1.8