Strain Fitness in Pseudomonas simiae WCS417 around PS417_20360

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,417,057	-		PS417_20350	0.18	-0.2
4,417,057	-		PS417_20350	0.18	-1.6
4,417,079	+				-1.9
4,417,200	+		PS417_20350	0.47	-1.4
4,417,201	-		PS417_20350	0.47	-0.7
4,417,266	+				+3.7
4,417,266	+		PS417_20350	0.60	-0.7
4,417,266	+		PS417_20350	0.60	+0.7
4,417,269	+		PS417_20350	0.61	+0.8
4,417,269	+		PS417_20350	0.61	-0.6
4,417,291	+		PS417_20350	0.65	+1.4
4,417,318	-		PS417_20350	0.71	+0.1
4,417,318	-		PS417_20350	0.71	-0.6
4,417,397	+		PS417_20350	0.87	-0.6
4,417,398	-		PS417_20350	0.87	-0.2
4,417,473	+				+1.3
4,417,474	-				-0.7
4,417,474	-				+1.4
4,417,484	-				+0.9
4,417,506	+				-0.2
4,417,527	+				+0.5
4,417,527	+				-0.4
4,417,549	+				-0.0
4,417,550	-				-1.0
4,417,585	+				+1.5
4,417,585	+				+0.4
4,417,616	+				-0.3
4,417,617	-				-0.0
4,417,617	-				+0.2
4,417,617	-				+2.9
4,417,617	-				+0.1
4,417,627	-				-0.4
4,417,650	+				-1.1
4,417,673	+				+0.8
4,417,673	+				-0.7
4,417,674	-				+0.1
4,417,674	-				-1.0
4,417,677	+				+0.1
4,417,677	+				-1.6
4,417,678	-				-0.8
4,417,678	-				-1.2
4,417,680	+				-1.3
4,417,680	+				-0.6
4,417,681	-		PS417_20355	0.10	+1.0
4,417,699	+		PS417_20355	0.16	-1.0
4,417,700	-		PS417_20355	0.16	-0.2
4,417,700	-		PS417_20355	0.16	-2.9
4,417,735	-		PS417_20355	0.27	-0.1
4,417,887	-				+0.4
4,417,957	+				-2.6
4,417,958	-				-1.0
4,417,982	+				+0.2
4,417,983	-				-0.6
4,418,083	+		PS417_20360	0.16	+0.8
4,418,083	+		PS417_20360	0.16	-1.2
4,418,083	+		PS417_20360	0.16	-1.3
4,418,129	+		PS417_20360	0.23	+1.1
4,418,129	+				+3.4
4,418,269	-		PS417_20360	0.42	+1.7
4,418,298	-		PS417_20360	0.46	+1.6
4,418,311	-		PS417_20360	0.48	-0.9
4,418,318	+		PS417_20360	0.48	+1.4
4,418,319	-		PS417_20360	0.49	-1.0
4,418,319	-		PS417_20360	0.49	+0.3
4,418,514	-		PS417_20360	0.75	-0.3
4,418,537	+		PS417_20360	0.78	-1.6
4,418,537	+		PS417_20360	0.78	-0.7
4,418,537	+		PS417_20360	0.78	-0.4
4,418,538	-		PS417_20360	0.79	+1.6
4,418,538	-		PS417_20360	0.79	-0.1
4,418,538	-		PS417_20360	0.79	-0.2
4,418,679	-				+0.7
4,418,679	-				+0.1
4,418,758	-				-0.5
4,418,899	+				+1.2
4,418,930	+				+0.6
4,418,930	+				-1.2
4,418,930	+				+0.4
4,418,930	+				+5.6
4,418,931	-				-0.1
4,418,931	-				-0.5
4,418,992	+				+1.6
4,418,993	-				-3.7
4,418,993	-				-0.1
4,418,993	-				-0.1
4,418,993	-				-0.6
4,419,008	+				-0.2
4,419,009	-				+0.0
4,419,058	-				+0.4
4,419,058	-				-0.2
4,419,058	-				+0.2
4,419,058	-				+0.2
4,419,058	-				-0.3
4,419,102	-		PS417_20365	0.17	+1.0
4,419,196	+		PS417_20365	0.39	-0.7
4,419,196	+		PS417_20365	0.39	-3.2
4,419,197	-		PS417_20365	0.40	-2.3
4,419,209	+				+0.4
4,419,320	-		PS417_20365	0.69	-0.4
4,419,415	+				+0.5
4,419,416	-				+2.7
4,419,486	+				-0.5
4,419,546	+		PS417_20370	0.13	+0.8
4,419,639	+		PS417_20370	0.27	-0.5
4,419,668	-		PS417_20370	0.32	+0.2