Strain Fitness in Pseudomonas simiae WCS417 around PS417_18725

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,063,874	-		PS417_18720	0.31	-0.3
4,063,874	-		PS417_18720	0.31	-0.3
4,063,985	-		PS417_18720	0.43	-1.5
4,064,143	+		PS417_18720	0.60	-1.2
4,064,144	-		PS417_18720	0.60	-0.8
4,064,144	-		PS417_18720	0.60	-0.2
4,064,144	-		PS417_18720	0.60	-0.0
4,064,305	+		PS417_18720	0.77	+1.1
4,064,306	-		PS417_18720	0.77	-0.5
4,064,306	-		PS417_18720	0.77	+1.1
4,064,369	-		PS417_18720	0.84	+0.2
4,064,486	+				-0.2
4,064,533	-				-1.0
4,064,555	+				-0.2
4,064,555	+				-1.7
4,064,556	-				-2.3
4,064,586	-				-0.6
4,064,642	+				-1.7
4,064,642	+				-2.0
4,064,642	+				-0.3
4,064,643	-				+0.7
4,064,643	-				-0.3
4,064,744	-				+0.6
4,064,744	-				-0.7
4,064,809	+				+0.6
4,064,827	-				-0.3
4,064,827	-				-0.9
4,064,827	-				+1.4
4,065,074	-		PS417_18725	0.22	-0.6
4,065,074	-		PS417_18725	0.22	-1.0
4,065,084	+		PS417_18725	0.23	+1.7
4,065,085	-				+1.4
4,065,085	-		PS417_18725	0.23	-0.9
4,065,085	-		PS417_18725	0.23	+0.5
4,065,253	-		PS417_18725	0.40	-0.0
4,065,341	+		PS417_18725	0.49	-1.8
4,065,342	-		PS417_18725	0.49	+0.4
4,065,376	+		PS417_18725	0.52	+0.5
4,065,415	+		PS417_18725	0.56	-1.1
4,065,415	+		PS417_18725	0.56	-0.1
4,065,514	-		PS417_18725	0.66	-1.7
4,065,514	-		PS417_18725	0.66	-1.7
4,065,889	-				+0.1
4,065,892	-				+1.7
4,065,900	+				+0.1
4,066,650	+		PS417_18730	0.79	-0.9
4,066,749	+		PS417_18730	0.89	-1.6
4,066,750	-		PS417_18730	0.89	-2.1