Strain Fitness in Pseudomonas simiae WCS417 around PS417_18605

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,040,585	+		PS417_18600	0.80	+3.0
4,040,786	+				+1.0
4,040,786	+				+0.5
4,040,786	+				-0.8
4,040,787	-				+0.5
4,040,787	-				-2.2
4,040,787	-				-0.2
4,040,886	+				+3.9
4,041,134	-		PS417_18605	0.14	+0.8
4,041,334	+				-1.2
4,041,334	+		PS417_18605	0.37	+0.6
4,041,338	+		PS417_18605	0.37	+0.6
4,041,339	-				-0.2
4,041,339	-		PS417_18605	0.37	+0.6
4,041,339	-		PS417_18605	0.37	+2.2
4,041,355	-		PS417_18605	0.39	+0.3
4,041,599	+		PS417_18605	0.67	+0.3
4,041,672	-		PS417_18605	0.75	+0.9
4,041,675	+		PS417_18605	0.75	+1.3
4,041,676	-		PS417_18605	0.75	+0.1
4,041,686	+		PS417_18605	0.76	-0.3
4,041,761	+		PS417_18605	0.85	+1.3
4,041,796	+		PS417_18605	0.89	+0.5
4,041,802	-		PS417_18605	0.89	+1.2
4,041,802	-		PS417_18605	0.89	-0.0
4,041,961	+				+0.2
4,041,962	-				-1.8
4,042,680	-		PS417_18610	0.22	-0.2
4,042,680	-		PS417_18610	0.22	+1.0
4,042,882	-		PS417_18610	0.28	-0.0