Strain Fitness in Pseudomonas simiae WCS417 around PS417_18410

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
4,007,249	+		PS417_18405	0.55	+1.4
4,007,698	-				+0.1
4,007,698	-				-0.3
4,007,831	-				-0.0
4,007,912	+				-0.0
4,007,918	+				+0.7
4,007,918	+				+0.1
4,007,919	-				-1.0
4,007,919	-				+2.1
4,007,919	-				+0.7
4,007,919	-				+0.1
4,007,919	-				+0.0
4,008,188	+				+1.5
4,008,189	-				-0.6
4,008,189	-				+3.4
4,008,409	-		PS417_18410	0.16	+0.8
4,008,409	-		PS417_18410	0.16	+0.2
4,008,630	+		PS417_18410	0.36	-0.3
4,008,730	-		PS417_18410	0.46	-0.2
4,008,836	+		PS417_18410	0.55	+0.8
4,008,837	-		PS417_18410	0.55	-0.3
4,008,900	+		PS417_18410	0.61	+2.4
4,008,901	-		PS417_18410	0.61	+1.3
4,008,991	-				-0.2
4,009,207	-		PS417_18410	0.89	+0.9
4,009,207	-		PS417_18410	0.89	-0.5
4,009,207	-		PS417_18410	0.89	+1.4
4,009,384	-				-1.2
4,009,458	+				-0.1
4,009,479	-				-0.6
4,009,711	+		PS417_18415	0.86	+0.3
4,009,764	+				-0.3
4,009,764	+				-2.9
4,009,879	+		PS417_18420	0.19	-0.5
4,009,894	+		PS417_18420	0.21	-1.4
4,009,894	+		PS417_18420	0.21	-0.2
4,009,895	-		PS417_18420	0.21	-1.9
4,010,258	-		PS417_18420	0.74	-1.7
4,010,258	-		PS417_18420	0.74	-1.1
4,010,312	+		PS417_18420	0.81	-1.7
4,010,313	-		PS417_18420	0.82	-1.2