Strain Fitness in Pseudomonas simiae WCS417 around PS417_17765

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,876,389	+				-1.8
3,876,390	-				-1.0
3,876,390	-				+0.1
3,876,459	+				+3.4
3,876,552	+				-0.2
3,876,552	+				-0.1
3,876,553	-				+1.0
3,876,553	-				-1.4
3,876,553	-				-0.1
3,876,636	+				-2.4
3,876,875	+				-0.1
3,876,875	+				-0.9
3,876,875	+				-0.3
3,876,875	+				-1.0
3,876,876	-				+0.0
3,877,189	+				-0.2
3,877,192	-				-1.6
3,877,236	+				-0.6
3,877,237	-				+0.4
3,877,357	+				-0.0
3,877,701	+		PS417_17765	0.39	+2.4
3,877,755	+		PS417_17765	0.44	-1.6
3,877,761	+		PS417_17765	0.44	-2.5
3,877,761	+		PS417_17765	0.44	+1.7
3,877,762	-		PS417_17765	0.45	-0.9
3,877,762	-		PS417_17765	0.45	+0.2
3,878,007	+		PS417_17765	0.68	-1.3
3,878,007	+				+0.4
3,878,163	+		PS417_17765	0.82	+0.3
3,878,163	+		PS417_17765	0.82	+2.1
3,878,164	-		PS417_17765	0.82	+0.5
3,878,341	+				-0.3
3,878,341	+				+1.4
3,878,341	+				-0.8
3,878,807	+		PS417_17770	0.19	+0.1
3,878,945	+		PS417_17770	0.25	-0.1
3,878,946	-		PS417_17770	0.25	-0.2
3,878,974	+		PS417_17770	0.26	+0.5
3,879,024	+		PS417_17770	0.28	-0.7
3,879,024	+		PS417_17770	0.28	+0.4
3,879,113	+		PS417_17770	0.31	-0.0