Strain Fitness in Pseudomonas simiae WCS417 around PS417_17620

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,844,174	-		PS417_17610	0.71	+2.4
3,844,259	+		PS417_17610	0.88	+1.9
3,844,325	-				+0.6
3,844,519	+		PS417_17615	0.24	-1.4
3,844,523	-		PS417_17615	0.24	+1.6
3,844,523	-		PS417_17615	0.24	+0.0
3,844,624	+		PS417_17615	0.36	+0.5
3,844,624	+		PS417_17615	0.36	+4.4
3,844,625	-				-0.6
3,844,736	-		PS417_17615	0.50	-0.4
3,844,909	+		PS417_17615	0.71	-0.4
3,844,909	+		PS417_17615	0.71	-0.9
3,844,910	-		PS417_17615	0.71	+0.6
3,844,939	+		PS417_17615	0.74	-3.2
3,845,279	+		PS417_17620	0.11	+0.4
3,845,542	-		PS417_17620	0.32	-0.9
3,845,652	+		PS417_17620	0.41	-1.9
3,845,652	+		PS417_17620	0.41	+1.1
3,845,784	+		PS417_17620	0.52	-1.7
3,845,785	-		PS417_17620	0.52	-0.5
3,845,952	+		PS417_17620	0.66	+0.9
3,845,953	-		PS417_17620	0.66	+0.5
3,845,953	-		PS417_17620	0.66	+1.3
3,845,953	-		PS417_17620	0.66	-0.1
3,846,156	+		PS417_17620	0.82	+0.5
3,846,156	+		PS417_17620	0.82	+0.8
3,846,192	-		PS417_17620	0.85	+1.0
3,846,192	-		PS417_17620	0.85	-1.2
3,846,192	-		PS417_17620	0.85	+2.3
3,846,229	-		PS417_17620	0.88	-0.4
3,846,324	+				-2.6
3,846,437	-				-0.2
3,846,515	+				-2.2
3,846,515	+				-0.9
3,846,609	-		PS417_17625	0.12	+0.6
3,846,609	-		PS417_17625	0.12	-2.4
3,846,677	+		PS417_17625	0.17	+0.1
3,846,677	+		PS417_17625	0.17	-2.5
3,846,678	-				+1.0
3,846,678	-		PS417_17625	0.17	+0.2
3,846,678	-		PS417_17625	0.17	+0.2
3,846,896	+		PS417_17625	0.33	+0.4
3,846,900	+		PS417_17625	0.34	-3.2
3,846,900	+		PS417_17625	0.34	+2.3
3,846,932	+		PS417_17625	0.36	+1.4
3,846,947	+		PS417_17625	0.37	-0.4
3,847,209	-		PS417_17625	0.57	-0.1
3,847,312	+		PS417_17625	0.65	+1.1
3,847,312	+		PS417_17625	0.65	-1.7
3,847,312	+		PS417_17625	0.65	-1.3
3,847,312	+		PS417_17625	0.65	-0.8
3,847,312	+		PS417_17625	0.65	-0.6
3,847,313	-				-0.9
3,847,313	-		PS417_17625	0.65	-0.1
3,847,313	-		PS417_17625	0.65	-0.7
3,847,313	-		PS417_17625	0.65	+0.3
3,847,313	-				+2.0
3,847,313	-		PS417_17625	0.65	-1.6
3,847,313	-		PS417_17625	0.65	-1.4