Strain Fitness in Pseudomonas simiae WCS417 around PS417_17585

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,838,630	-		PS417_17580	0.15	-2.2
3,838,630	-		PS417_17580	0.15	-0.1
3,838,630	-		PS417_17580	0.15	+0.1
3,838,930	-		PS417_17580	0.48	+0.2
3,839,324	-				-1.2
3,839,464	+				+1.0
3,839,515	+				-0.6
3,839,531	-				+1.1
3,839,638	+		PS417_17585	0.20	+0.6
3,839,639	-		PS417_17585	0.20	+0.4
3,840,312	-		PS417_17585	0.84	+1.4
3,840,346	+		PS417_17585	0.87	+0.1
3,840,346	+		PS417_17585	0.87	-0.2
3,840,701	+				-0.6
3,840,708	+				+1.4
3,840,711	-				-0.2
3,841,057	+		PS417_17590	0.43	+0.2
3,841,223	+		PS417_17590	0.64	+0.8
3,841,223	+		PS417_17590	0.64	-0.2
3,841,445	+				+0.3
3,841,445	+				-0.1
3,841,445	+				+2.2
3,841,445	+				-0.6
3,841,446	-				-2.3
3,841,467	-				-0.2