Strain Fitness in Pseudomonas simiae WCS417 around PS417_17120

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,737,455	-		PS417_17115	0.29	-2.3
3,737,636	-		PS417_17115	0.46	+0.2
3,737,669	-		PS417_17115	0.49	-0.0
3,737,971	+		PS417_17115	0.76	+0.4
3,737,972	-		PS417_17115	0.76	-0.0
3,737,972	-		PS417_17115	0.76	-1.4
3,737,992	+				-0.9
3,737,992	+		PS417_17115	0.78	+0.9
3,738,060	+		PS417_17115	0.84	-0.7
3,738,083	-		PS417_17115	0.86	+0.7
3,738,083	-		PS417_17115	0.86	+1.0
3,738,276	+				-1.6
3,738,809	-		PS417_17120	0.42	-0.6
3,738,976	+		PS417_17120	0.55	+2.7
3,738,976	+		PS417_17120	0.55	-1.7
3,739,183	+		PS417_17120	0.71	+1.8
3,739,184	-		PS417_17120	0.71	-0.6
3,739,184	-		PS417_17120	0.71	-0.2
3,739,291	+		PS417_17120	0.79	+0.2
3,739,302	+		PS417_17120	0.80	+2.2
3,739,681	+				-0.4
3,739,801	+		PS417_17125	0.17	+0.2
3,739,801	+		PS417_17125	0.17	+1.8
3,739,802	-		PS417_17125	0.17	-1.4
3,740,075	+		PS417_17125	0.56	-1.4
3,740,140	+		PS417_17125	0.65	+0.3
3,740,360	+				+2.6
3,740,452	-				+0.5
3,740,470	-				-1.5