Strain Fitness in Pseudomonas simiae WCS417 around PS417_16160

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,543,213	+		PS417_16155	0.70	-0.0
3,543,214	-		PS417_16155	0.70	+0.3
3,543,287	+		PS417_16155	0.75	+0.6
3,543,287	+		PS417_16155	0.75	-0.3
3,543,288	-		PS417_16155	0.75	-1.5
3,543,341	+		PS417_16155	0.79	-0.8
3,543,500	+				+0.0
3,543,500	+				-0.6
3,543,680	-				+2.0
3,543,680	-				-0.3
3,543,739	+		PS417_16160	0.14	-1.2
3,543,932	-		PS417_16160	0.34	-1.2
3,544,256	-		PS417_16160	0.69	-0.4
3,544,259	-		PS417_16160	0.69	-1.6
3,544,259	-				-0.6
3,544,676	+				-0.5
3,544,677	-				+0.3
3,544,689	+				+0.5
3,544,734	+				+0.8
3,544,800	+				-1.9
3,544,800	+				+0.4
3,544,800	+				+0.4
3,544,801	-				-0.2
3,544,801	-				-0.7
3,544,801	-				-0.7
3,545,222	+				-0.2
3,545,420	+		PS417_16165	0.66	+0.5
3,545,421	-		PS417_16165	0.66	+2.5
3,545,430	-				-0.2
3,545,432	+		PS417_16165	0.68	-0.4
3,545,433	-		PS417_16165	0.68	-1.0
3,545,487	-		PS417_16165	0.73	-0.6