Strain Fitness in Pseudomonas simiae WCS417 around PS417_16130

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,537,382	-		PS417_16125	0.53	+0.5
3,537,382	-		PS417_16125	0.53	+1.1
3,537,385	+		PS417_16125	0.54	+0.9
3,537,386	-				+0.7
3,537,403	+		PS417_16125	0.55	-0.9
3,537,403	+		PS417_16125	0.55	+1.4
3,537,403	+		PS417_16125	0.55	-0.8
3,537,511	+				+0.4
3,537,511	+		PS417_16125	0.67	-1.0
3,537,618	+		PS417_16125	0.78	+1.1
3,538,205	+		PS417_16130	0.27	+1.3
3,538,205	+		PS417_16130	0.27	+0.7
3,538,205	+		PS417_16130	0.27	-0.7
3,538,206	-		PS417_16130	0.28	+0.2
3,538,565	+		PS417_16130	0.77	-0.1
3,538,565	+		PS417_16130	0.77	+1.9
3,538,565	+		PS417_16130	0.77	+1.3
3,538,565	+		PS417_16130	0.77	-0.3
3,538,566	-		PS417_16130	0.77	+0.5
3,538,566	-		PS417_16130	0.77	+1.3
3,538,852	+				+0.1
3,539,061	-		PS417_16135	0.48	+0.4
3,539,325	-				+0.2
3,539,391	+				-1.2
3,539,391	+				+0.2
3,539,391	+				+0.1
3,539,392	-				-1.1
3,539,399	-				-0.9
3,539,475	+				+2.0
3,539,663	-		PS417_16140	0.31	+0.8