Strain Fitness in Pseudomonas simiae WCS417 around PS417_16090

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,526,579	-		PS417_16085	0.20	+2.9
3,526,771	-		PS417_16085	0.42	-0.9
3,527,085	+		PS417_16085	0.78	+0.5
3,527,085	+		PS417_16085	0.78	+0.1
3,527,085	+		PS417_16085	0.78	+1.4
3,527,085	+		PS417_16085	0.78	+0.4
3,527,086	-		PS417_16085	0.78	+0.8
3,527,089	-		PS417_16085	0.78	+1.4
3,527,459	+				-0.3
3,527,463	+				-1.4
3,527,478	+				+0.6
3,527,479	-				-0.1
3,527,524	+				-1.5
3,528,021	+				+1.4
3,528,022	-		PS417_16090	0.88	-2.4
3,528,121	-				-0.1
3,528,121	-				+0.2
3,528,621	+		PS417_16095	0.27	-1.8
3,528,756	+		PS417_16095	0.34	-0.3
3,528,756	+		PS417_16095	0.34	+0.1
3,528,757	-		PS417_16095	0.34	-1.2