Strain Fitness in Pseudomonas simiae WCS417 around PS417_15595

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,418,796	+		PS417_15585	0.79	+2.8
3,418,797	-		PS417_15585	0.79	-0.4
3,418,874	+		PS417_15585	0.85	+2.1
3,418,875	-		PS417_15585	0.85	-2.1
3,419,073	+				+0.5
3,419,073	+				+0.8
3,419,449	+		PS417_15590	0.57	-1.3
3,419,449	+		PS417_15590	0.57	-0.8
3,419,450	-		PS417_15590	0.58	-1.0
3,419,451	+		PS417_15590	0.58	-0.4
3,419,786	+		PS417_15595	0.12	-0.6
3,419,935	-		PS417_15595	0.36	+0.1
3,420,124	-		PS417_15595	0.67	-1.4
3,420,401	+				+3.8
3,420,401	+				+0.4
3,420,402	-				+0.1
3,420,424	-				-1.8
3,420,424	-				+0.0
3,420,841	-				-0.6
3,420,901	-				-0.1
3,421,010	-				-0.1
3,421,018	+				+0.4
3,421,145	-				-0.5
3,421,172	-				-0.4
3,421,249	+				-0.3
3,421,249	+				-1.2
3,421,250	-				-1.2
3,421,250	-				-2.1