Strain Fitness in Pseudomonas simiae WCS417 around PS417_15550

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,403,590	+		PS417_15545	0.68	+0.4
3,403,591	-		PS417_15545	0.68	-1.6
3,403,823	+		PS417_15545	0.77	+0.4
3,404,034	+		PS417_15545	0.85	+0.6
3,404,041	-		PS417_15545	0.85	+2.4
3,404,053	+		PS417_15545	0.85	+0.9
3,404,053	+		PS417_15545	0.85	-0.1
3,404,055	+		PS417_15545	0.85	-0.3
3,404,055	+		PS417_15545	0.85	-2.2
3,404,055	+		PS417_15545	0.85	+0.0
3,404,056	-		PS417_15545	0.85	-0.7
3,404,056	-		PS417_15545	0.85	+0.5
3,404,056	-		PS417_15545	0.85	-0.2
3,404,088	+		PS417_15545	0.87	-0.2
3,404,280	+				+1.2
3,404,280	+				+0.1
3,404,280	+				-1.6
3,404,280	+				-0.9
3,404,281	-				-0.1
3,404,281	-				-0.1
3,404,307	+				-0.6
3,404,307	+				+1.1
3,404,342	+				+0.4
3,404,347	-				-0.6
3,404,476	+				+1.3
3,404,476	+				-1.0
3,404,477	-				-0.9
3,404,511	+				+1.4
3,404,511	+				-1.2
3,404,530	-				-0.2
3,404,530	-				+0.4
3,404,530	-				-0.8
3,404,530	-				+0.6
3,404,530	-				+0.7
3,404,587	-				+0.2
3,404,643	+				-0.7
3,404,644	-				+0.3
3,404,724	+		PS417_15550	0.15	+0.1
3,404,724	+		PS417_15550	0.15	+1.4
3,404,725	-		PS417_15550	0.15	-0.1
3,404,754	+		PS417_15550	0.17	-1.6
3,404,754	+		PS417_15550	0.17	+1.3
3,404,754	+		PS417_15550	0.17	+2.0
3,404,755	-		PS417_15550	0.17	+0.4
3,404,755	-		PS417_15550	0.17	-1.0
3,404,775	+		PS417_15550	0.19	+0.3
3,404,841	+		PS417_15550	0.23	-0.4
3,405,088	-		PS417_15550	0.41	+2.6
3,405,151	-		PS417_15550	0.45	+2.1
3,405,162	+		PS417_15550	0.46	-0.4
3,405,183	+		PS417_15550	0.48	-0.0
3,405,187	-		PS417_15550	0.48	-1.6
3,405,189	+		PS417_15550	0.48	+1.1
3,405,190	-		PS417_15550	0.48	-0.2
3,405,243	+				+1.4
3,405,244	-		PS417_15550	0.52	-0.1
3,405,763	-		PS417_15550	0.89	+0.8
3,405,763	-		PS417_15550	0.89	+1.5
3,405,765	+		PS417_15550	0.89	-0.2
3,405,765	+		PS417_15550	0.89	-0.8
3,405,765	+		PS417_15550	0.89	-0.2
3,405,765	+		PS417_15550	0.89	-0.9
3,405,766	-		PS417_15550	0.89	+1.3
3,405,962	+				-0.6
3,406,036	-				+0.9
3,406,083	+				+2.0
3,406,083	+				+1.0
3,406,299	+				-1.2
3,406,393	+		PS417_15555	0.13	-0.8
3,406,501	-		PS417_15555	0.21	+1.4
3,406,503	+		PS417_15555	0.21	-0.7
3,406,595	+		PS417_15555	0.28	+0.4