Strain Fitness in Pseudomonas simiae WCS417 around PS417_15410

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,376,833	-				+0.5
3,376,891	+		PS417_15400	0.17	-0.9
3,376,921	-		PS417_15400	0.28	-2.3
3,377,093	+				-0.0
3,377,160	-		PS417_15405	0.11	+0.4
3,377,180	-		PS417_15405	0.14	-0.5
3,377,419	+		PS417_15405	0.53	+0.9
3,377,420	-		PS417_15405	0.53	-0.1
3,377,493	-		PS417_15405	0.65	-0.6
3,377,536	+		PS417_15405	0.72	+0.4
3,377,684	+				-1.9
3,377,685	-				+1.2
3,377,685	-				-0.5
3,377,685	-				-0.9
3,377,688	+				+0.1
3,377,688	+				-0.8
3,377,688	+				-0.6
3,377,689	-				+1.5
3,377,689	-				-1.2
3,377,689	-				+0.1
3,377,699	+				-0.5
3,377,699	+				-0.6
3,377,700	-				-0.6
3,377,807	+				-0.6
3,378,018	-		PS417_15410	0.39	-0.1
3,378,114	+		PS417_15410	0.56	-3.7
3,378,482	-				-0.2
3,378,545	+				+0.2
3,378,878	+		PS417_15415	0.20	+0.9
3,378,878	+		PS417_15415	0.20	-0.1
3,379,007	+		PS417_15415	0.31	+2.1
3,379,008	-		PS417_15415	0.31	+0.8