Strain Fitness in Pseudomonas simiae WCS417 around PS417_14815

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,237,973	+				-1.2
3,238,012	+		PS417_14810	0.62	-0.2
3,238,013	-		PS417_14810	0.62	-0.7
3,238,237	-		PS417_14810	0.80	+0.7
3,238,271	-		PS417_14810	0.83	-0.3
3,238,397	-				+0.5
3,238,540	-				-0.1
3,238,540	-				-0.6
3,238,918	-		PS417_14815	0.29	+0.1
3,239,063	+		PS417_14815	0.41	-1.2
3,239,063	+		PS417_14815	0.41	-0.9
3,239,064	-				+1.4
3,239,264	+		PS417_14815	0.58	-2.1
3,239,707	+				-1.1
3,239,707	+				+0.6
3,239,742	-				+0.4
3,239,747	+				-0.2
3,239,966	+				-0.6
3,239,966	+		PS417_14825	0.43	+0.1
3,239,992	-		PS417_14825	0.52	+0.4
3,240,091	-		PS417_14825	0.84	+0.4
3,240,126	+				-0.1
3,240,126	+				-0.3
3,240,127	-				-0.6
3,240,178	+				+2.2
3,240,237	+				+1.4
3,240,455	-		PS417_14830	0.29	-1.9
3,240,515	+		PS417_14830	0.37	+1.2
3,240,515	+		PS417_14830	0.37	+0.5
3,240,516	-		PS417_14830	0.37	+1.1
3,240,516	-		PS417_14830	0.37	+0.5
3,240,599	+		PS417_14830	0.48	-3.5
3,240,600	-		PS417_14830	0.48	-1.8