Strain Fitness in Pseudomonas simiae WCS417 around PS417_14580

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,187,134	-		PS417_14575	0.35	-0.1
3,187,134	-				+2.0
3,187,193	+		PS417_14575	0.39	-0.6
3,187,442	+		PS417_14575	0.58	+0.4
3,187,442	+		PS417_14575	0.58	-0.3
3,187,443	-		PS417_14575	0.58	-1.1
3,187,443	-		PS417_14575	0.58	+0.0
3,187,443	-		PS417_14575	0.58	+0.8
3,187,444	+		PS417_14575	0.58	-1.2
3,187,469	+		PS417_14575	0.60	+0.2
3,187,470	-		PS417_14575	0.60	+0.3
3,187,568	+				-1.2
3,187,569	-		PS417_14575	0.67	+0.7
3,187,569	-				+1.4
3,187,569	-		PS417_14575	0.67	+0.4
3,187,807	+		PS417_14575	0.85	-1.0
3,187,807	+		PS417_14575	0.85	-0.5
3,187,807	+		PS417_14575	0.85	-0.0
3,187,808	-		PS417_14575	0.85	-0.4
3,188,007	-				+0.4
3,188,075	+				-0.4
3,188,076	-				+1.0
3,188,076	-				+0.8
3,188,076	-				-1.6
3,188,076	-				-1.9
3,188,129	+		PS417_14580	0.11	+0.2
3,188,264	+		PS417_14580	0.23	-2.5
3,188,264	+		PS417_14580	0.23	-1.4
3,188,264	+		PS417_14580	0.23	-1.5
3,188,265	-		PS417_14580	0.23	-0.8
3,188,555	-		PS417_14580	0.49	-1.2
3,188,865	-		PS417_14580	0.76	+0.2
3,189,381	-		PS417_14585	0.14	+0.1
3,189,488	+		PS417_14585	0.23	-0.0
3,189,619	-		PS417_14585	0.35	+0.1
3,189,620	+		PS417_14585	0.35	+0.5
3,189,620	+		PS417_14585	0.35	+0.5
3,189,621	-		PS417_14585	0.35	-0.3
3,189,714	-		PS417_14585	0.43	+0.2
3,189,715	+		PS417_14585	0.43	+0.4
3,189,716	-		PS417_14585	0.43	+0.3
3,189,720	-		PS417_14585	0.43	+0.9
3,189,734	+		PS417_14585	0.44	-0.8
3,189,734	+		PS417_14585	0.44	+0.4
3,189,735	-		PS417_14585	0.44	+2.7
3,189,735	-		PS417_14585	0.44	-0.6
3,189,735	-		PS417_14585	0.44	-0.9
3,189,735	-		PS417_14585	0.44	-0.3
3,189,735	-		PS417_14585	0.44	-3.3
3,189,735	-		PS417_14585	0.44	+0.0