Strain Fitness in Pseudomonas simiae WCS417 around PS417_14535

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,176,827	-		PS417_14530	0.11	-0.3
3,177,274	+		PS417_14530	0.70	-0.1
3,177,274	+		PS417_14530	0.70	-2.8
3,177,275	-		PS417_14530	0.70	-0.2
3,177,516	+				-0.6
3,177,545	+				+0.2
3,177,546	-				+0.2
3,177,556	+				-0.4
3,177,587	+				+1.9
3,177,902	-		PS417_14535	0.25	-0.9
3,177,902	-		PS417_14535	0.25	+2.0
3,177,902	-		PS417_14535	0.25	-0.4
3,177,902	-		PS417_14535	0.25	-1.2
3,178,556	-		PS417_14535	0.88	-1.6
3,178,579	+				+1.2
3,178,579	+				-1.9
3,178,691	+				+0.6
3,178,691	+				+0.4
3,178,692	-				+2.4
3,179,017	-		PS417_14540	0.71	+0.6
3,179,361	+		PS417_14545	0.17	-0.7
3,179,361	+		PS417_14545	0.17	-0.3
3,179,362	-		PS417_14545	0.17	+3.0
3,179,386	+		PS417_14545	0.18	+0.1
3,179,387	-		PS417_14545	0.18	+0.9
3,179,387	-		PS417_14545	0.18	+0.3
3,179,492	-		PS417_14545	0.26	+0.1
3,179,507	-		PS417_14545	0.27	-1.6