Strain Fitness in Pseudomonas simiae WCS417 around PS417_14200

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
3,112,085	-		PS417_14195	0.68	-0.1
3,112,226	+		PS417_14195	0.73	-2.3
3,112,344	-		PS417_14195	0.77	-0.1
3,112,465	+		PS417_14195	0.82	-0.3
3,112,470	+		PS417_14195	0.82	-2.4
3,112,470	+		PS417_14195	0.82	-0.9
3,112,471	-		PS417_14195	0.82	-0.6
3,112,471	-				+0.4
3,112,471	-		PS417_14195	0.82	-0.8
3,112,809	+				-1.2
3,112,809	+				+1.4
3,112,810	-				+0.0
3,112,810	-				+0.2
3,112,810	-				-2.4
3,112,932	+				-1.1
3,113,026	+				-0.6
3,113,027	-				-0.6
3,113,027	-				+0.4
3,113,027	-				+0.5
3,113,121	+		PS417_14200	0.27	-0.2
3,113,121	+		PS417_14200	0.27	-0.9
3,113,121	+		PS417_14200	0.27	-1.2
3,113,122	-		PS417_14200	0.27	-0.4
3,113,365	-				-2.3
3,113,482	-		PS417_14205	0.11	+1.0
3,113,485	-		PS417_14205	0.11	-0.0
3,113,597	+		PS417_14205	0.25	-1.0
3,113,597	+		PS417_14205	0.25	-0.2
3,113,597	+		PS417_14205	0.25	+0.4
3,113,598	-		PS417_14205	0.25	+0.1
3,113,598	-		PS417_14205	0.25	+0.2
3,113,978	+		PS417_14205	0.71	-0.2
3,113,978	+		PS417_14205	0.71	-0.6
3,113,979	-		PS417_14205	0.71	+1.0
3,113,979	-		PS417_14205	0.71	-1.8
3,113,979	-		PS417_14205	0.71	+0.6
3,114,287	+		PS417_14210	0.11	+0.3
3,114,287	+		PS417_14210	0.11	-0.7
3,114,287	+				-0.2
3,114,338	+		PS417_14210	0.18	-0.8
3,114,339	-		PS417_14210	0.19	-3.0