Strain Fitness in Pseudomonas simiae WCS417 around PS417_13320

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,926,969	+		PS417_13315	0.71	+0.6
2,926,970	-		PS417_13315	0.72	-0.9
2,926,970	-		PS417_13315	0.72	-0.2
2,927,272	+		PS417_13315	0.89	-0.5
2,927,272	+		PS417_13315	0.89	-1.4
2,927,273	-		PS417_13315	0.89	-0.2
2,927,273	-		PS417_13315	0.89	+1.7
2,927,404	+				-0.1
2,927,405	-				+0.5
2,927,452	+				-3.0
2,927,453	-				+1.4
2,927,600	-		PS417_13320	0.12	-0.6
2,927,748	+		PS417_13320	0.24	-1.6
2,928,270	+		PS417_13320	0.68	+0.9
2,928,271	-		PS417_13320	0.68	-0.7
2,928,271	-		PS417_13320	0.68	-1.0
2,928,271	-				-0.6
2,928,387	+		PS417_13320	0.78	+0.6
2,928,387	+		PS417_13320	0.78	+0.9
2,928,501	+		PS417_13320	0.88	+0.1
2,928,501	+		PS417_13320	0.88	+0.6
2,928,631	-				+0.2
2,928,649	+				-0.2
2,928,649	+				+0.4
2,928,728	-		PS417_13325	0.10	+0.2
2,929,253	+		PS417_13325	0.70	+0.5
2,929,253	+		PS417_13325	0.70	-0.8
2,929,254	-		PS417_13325	0.70	-1.6
2,929,254	-		PS417_13325	0.70	+0.1
2,929,396	+		PS417_13325	0.86	+0.6
2,929,579	+				-0.9
2,929,579	+				-1.5