Strain Fitness in Pseudomonas simiae WCS417 around PS417_13135

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,870,485	+		PS417_13130	0.56	+2.6
2,870,809	-				+0.6
2,870,852	+				-2.6
2,870,852	+				-2.0
2,870,853	-				-0.1
2,870,867	-				-1.0
2,870,942	+				-0.5
2,870,942	+				-0.3
2,870,963	+				+0.8
2,870,990	-				-1.6
2,871,011	-				-1.5
2,871,093	+		PS417_13135	0.18	+0.4
2,871,093	+				-2.1
2,871,264	+		PS417_13135	0.72	-0.7
2,871,264	+		PS417_13135	0.72	-1.2
2,871,268	+		PS417_13135	0.73	+0.0
2,871,269	-		PS417_13135	0.74	+1.4
2,871,325	+				-1.6
2,871,325	+				-0.9
2,871,326	-				+0.7
2,871,326	-				+1.8
2,871,326	-				-1.5
2,871,372	-				+0.5
2,871,701	-		PS417_13140	0.29	+0.8
2,871,701	-				-0.6
2,871,961	+		PS417_13140	0.52	+0.8
2,872,150	+		PS417_13140	0.68	+2.4