Strain Fitness in Pseudomonas simiae WCS417 around PS417_12990

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,836,874	-		PS417_12985	0.39	-1.0
2,837,105	-		PS417_12985	0.56	-1.1
2,837,179	+		PS417_12985	0.61	-1.2
2,837,179	+		PS417_12985	0.61	+1.1
2,837,180	-		PS417_12985	0.61	-1.5
2,837,378	-		PS417_12985	0.75	-0.9
2,837,378	-		PS417_12985	0.75	+0.8
2,837,668	+				-1.0
2,837,702	+				-1.2
2,838,015	+		PS417_12990	0.20	-0.1
2,838,093	+		PS417_12990	0.27	-0.2
2,838,297	+		PS417_12990	0.46	+0.4
2,838,298	-		PS417_12990	0.46	+3.8
2,838,564	+		PS417_12990	0.71	-1.8
2,838,777	-				-1.6
2,839,462	-		PS417_12995	0.42	+0.4
2,839,586	-		PS417_12995	0.52	-0.3
2,839,808	-		PS417_12995	0.69	-0.4
2,839,810	+		PS417_12995	0.69	-0.1
2,839,810	+		PS417_12995	0.69	+0.2
2,839,867	+		PS417_12995	0.73	+0.0
2,839,867	+		PS417_12995	0.73	+2.6