Strain Fitness in Pseudomonas simiae WCS417 around PS417_12975

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,834,429	+		PS417_12965	0.83	-0.6
2,834,429	+				+0.4
2,834,631	+				+0.2
2,834,682	-				-1.0
2,834,684	-				+0.9
2,834,805	+		PS417_12970	0.21	-1.9
2,834,806	-		PS417_12970	0.21	-2.1
2,834,825	+		PS417_12970	0.24	+2.7
2,834,825	+		PS417_12970	0.24	-0.4
2,834,826	-		PS417_12970	0.25	+1.6
2,834,826	-		PS417_12970	0.25	-1.1
2,835,004	-		PS417_12970	0.55	-0.4
2,835,120	-		PS417_12970	0.74	+1.0
2,835,155	+		PS417_12970	0.80	+1.8
2,835,350	+		PS417_12975	0.18	-2.4
2,835,466	-		PS417_12975	0.44	-1.6
2,835,478	+		PS417_12975	0.47	-0.8
2,835,479	-		PS417_12975	0.47	-0.6
2,835,482	+		PS417_12975	0.48	-1.2
2,835,483	-		PS417_12975	0.48	-0.3
2,835,493	+		PS417_12975	0.51	-1.4
2,835,494	-		PS417_12975	0.51	-0.5
2,835,494	-		PS417_12975	0.51	-0.4
2,836,110	+		PS417_12980	0.85	-1.2
2,836,331	-				+1.1
2,836,539	-		PS417_12985	0.16	-2.0