Strain Fitness in Pseudomonas simiae WCS417 around PS417_12950

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,830,048	-		PS417_12940	0.83	-1.5
2,830,048	-		PS417_12940	0.83	-0.3
2,830,170	-				-0.5
2,830,250	+				+0.7
2,830,402	+		PS417_12945	0.22	-0.0
2,830,672	+		PS417_12945	0.60	-0.8
2,830,672	+		PS417_12945	0.60	-0.8
2,830,929	+				+0.2
2,831,791	+				-0.3
2,831,792	-				+0.4
2,832,046	+		PS417_12955	0.27	-1.0
2,832,118	+		PS417_12955	0.34	-1.2
2,832,428	-		PS417_12955	0.67	-0.4
2,832,434	-		PS417_12955	0.67	-0.4
2,832,434	-		PS417_12955	0.67	+0.0
2,832,434	-		PS417_12955	0.67	-0.9
2,832,434	-		PS417_12955	0.67	+1.0
2,832,471	+		PS417_12955	0.71	+0.2
2,832,524	-		PS417_12955	0.77	-1.1
2,832,632	-		PS417_12955	0.88	+0.4
2,832,634	+		PS417_12955	0.88	-2.7
2,832,723	+				-0.4