Strain Fitness in Pseudomonas simiae WCS417 around PS417_12865

Experiment: JP1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JP1 MOI 1
2,812,910	+				+0.4
2,812,911	-				+0.8
2,812,968	-				-0.3
2,812,978	-				+1.4
2,812,978	-				+0.4
2,813,021	+				+0.2
2,813,021	+				-0.3
2,813,030	+				+1.1
2,813,030	+				-2.7
2,813,031	-				-0.6
2,813,031	-				+1.4
2,813,031	-				+1.9
2,813,031	-				-1.6
2,813,293	+		PS417_12860	0.36	-2.6
2,813,692	-				+0.1
2,813,724	+				+0.1
2,813,776	-				+0.8
2,813,776	-				-0.4
2,813,776	-				+0.5
2,814,003	+				+0.6
2,814,092	-		PS417_12865	0.28	+0.2
2,814,346	+		PS417_12865	0.48	+3.5
2,814,346	+		PS417_12865	0.48	+1.1
2,814,347	-		PS417_12865	0.48	+0.4
2,814,443	-		PS417_12865	0.56	+1.4
2,814,483	-		PS417_12865	0.59	+0.4
2,814,865	-		PS417_12865	0.90	-0.6
2,814,994	-				-0.8
2,815,022	+				-0.4
2,815,022	+				-0.5
2,815,023	-				-2.1
2,815,023	-				-1.6
2,815,023	-				-1.6
2,815,025	-				+1.2
2,815,145	-				+0.3
2,815,145	-				-0.5
2,815,146	+				-0.3
2,815,146	+				-0.6
2,815,146	+				+0.2
2,815,147	-				+0.1
2,815,147	-				+0.7
2,815,147	-				-0.4
2,815,147	-				+1.3
2,815,159	-				-0.2
2,815,702	+		PS417_12870	0.63	+1.8
2,815,865	-		PS417_12870	0.84	+0.3
2,815,900	+		PS417_12870	0.88	-0.6
2,815,923	+				-0.7